Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00952 ATGTCTGTAGTGGTAGTGAGATGCGTTCTCTTGTTGTCCATGCTTACGTTAGCATGGGCAAATAATCATGTGTTTATTACAAATCATCTGGAAGGAAGAGAAGATCTAAACATTCATTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCATATTAATCAATACTTCAGAATTACTTTTCAGCCTAACTTTTTCTTTGGAACACTCTTCTTTTGTTCGTTTCAATGGGGAAATGGTCCTTTGTTGTACTTTGACGTATACGACCAAAATACGGATTACTACAAGTGTGATGCTGATTGTAAATGGTATATTCATAAAGATGGACCATGTAGAAATGAACTACAAGATAACTCGTCATATGTTCGCAAATGTTATCCATGGAAAAAGTAA 396 0.3561 MSVVVVRCVLLLSMLTLAWANNHVFITNHLEGREDLNIHCKSKDDDLGPHVLHINQYFRITFQPNFFFGTLFFCSFQWGNGPLLYFDVYDQNTDYYKCDADCKWYIHKDGPCRNELQDNSSYVRKCYPWKK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00952 131 Pfam Plant self-incompatibility protein S1 23 129 IPR010264 -
Phac8g00952 131 PANTHER - 19 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00952 Phac-Chr8 6418207 6418693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00952 24 129 Carbohydrate Esterase AT3G16970 43.119 1.01e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00952 - - pvu:PHAVU_008G064000g 180.644