Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00948 ATGTCTGTGGTAGTGAGATGCGTTCTCTTGTTGTCCATGGTTACGTTGGCATGGGCAAATAATCATGTGTTTATTACGAATCATCTGGAAGGAAGAGAAGATCTAAACATTCACTGCAAATCCAAAGATGATGATCTTGGACCGCATGTTCTCCATATTAATCAATACATCAGAATTACTTTTCAGCCTAACTTTTTCTTTGGAACACTCTTCTTTTGTTCGTTTCAATGGGGAAATGGTCCTTTGTTGCACTTTGATGTATACGACCAAAATACGGACTACTACAAGTGTGATGCTGATTGTAAATGGTATGTTCATAAAGATGGACTATGTAGGAATGAACTACAAGATAACTCGTCATATGTTCGCAAATGTTATCCATGGAAACAGTAA 393 0.3715 MSVVVRCVLLLSMVTLAWANNHVFITNHLEGREDLNIHCKSKDDDLGPHVLHINQYIRITFQPNFFFGTLFFCSFQWGNGPLLHFDVYDQNTDYYKCDADCKWYVHKDGLCRNELQDNSSYVRKCYPWKQ* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00948 130 PANTHER - 18 114 IPR010264 -
Phac8g00948 130 Pfam Plant self-incompatibility protein S1 22 128 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00948 Phac-Chr8 6395338 6395730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00948 23 128 Carbohydrate Esterase AT3G16970 41.284 4.07e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00948 - - pvu:PHAVU_008G064600g 176.792