Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00938 ATGACTATGTTAGTGAGATGCGTTCTGTTGTTCTCCATGGTTACGATGGCATGGGGAAGTACTCATGTGTTTATTACGAATCATCTGGAAGGAAGAGAAGATCTTAACCTTCACTGCAAATCCAAAGATGATGATCTCGGACAGCATGTTCTTCATATTAATCAATACTTCAGAATTACTTTTGGGCCTAACTATTTCCTTCAAACACTTTTCTTTTGTTCGTTTCAATGGGGAAATGGTCCTTTGTTGCACTTTGACGTATACGACCAAAGTAAGGATTTGTACAAGTGTGCTCATGATTGTAGATGGTATGTTCATAAAGATGGACCATGTAGGAATGAACAACAAGAAGACTCCTCATATAGAAAAGTGATTAGCAGAAAAAGTGTGTTAGAAGTTGTTGCAATGTCTGAGTTAGTGAAAAACATTATGTTGTTGTCCATGCTTACGTTGGTGTGGGTAAGACATATTGATGTGTATATTACTAATAGTCTAGAAGGTTGA 504 0.369 MTMLVRCVLLFSMVTMAWGSTHVFITNHLEGREDLNLHCKSKDDDLGQHVLHINQYFRITFGPNYFLQTLFFCSFQWGNGPLLHFDVYDQSKDLYKCAHDCRWYVHKDGPCRNEQQEDSSYRKVISRKSVLEVVAMSELVKNIMLLSMLTLVWVRHIDVYITNSLEG* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00938 167 Pfam Plant self-incompatibility protein S1 22 118 IPR010264 -
Phac8g00938 167 PANTHER - 19 114 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00938 Phac-Chr8 6286805 6290550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00938 21 112 Carbohydrate Esterase AT3G16970 44.211 9.77e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00938 - - pvu:PHAVU_008G064000g 170.629