Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00888 ATGATGGGTAACGGGGAGCCTTTGGATTTGTATAAACTTTTCATGGTGGTAAAGAAGAAAGGTGGTTTTGATGCTGTCTGTAAGAATAGGTTGTGGGATTTGGTGGGGGAAGAATATGGGTTGGGTGTGAAGGTTGGTTCCTCTGTGGAACTTATTTACAGCAAACACTTGAGTACTCTAGAGACATGTTTGAAGAATGTTGCTGGTGGCAAGTTTGCTGAATGTGGTTTAGAGGATAGAGTTAAGTTTCACAAGCATTTGATGAAGGCACACACTGAATCCGTGTTGGACGATTCTGGCGGGGAGGAGGCGGGAGATGAACTTGAGAGGAGGGAGTGTGGCTGTCCGGATGGGAGGAAGTTCAGTGGTAGTAATAGAGTCAAGTGTGTGAAACCAGTGTCCAATGGGGTTGAACACGAGAGTGCATATGAGTATCTAGGTGGGAGTAAGTCATGTGGTAGTAATAGTATGAAAGACAAAAAATCAGGTCCTATCGGGGATGAATTTGATAATGTATGTGACTATCTAGAGGAGAGGAAGTTGTGCGGTACAAATAGGGTGAACGGGGTGAATCCAGATTCCAATGCGGCCAAGAAAGTTAGGAGGTCAGGACTTCGACTTGTTGATTTGGACATGCTGGAGGACCATGAGACGGAAAGTGACATGCTTAGATTGTCAGATGGAAGCAAGAGCAGCAATAAAGATAACGATGACGGTAGTGATGAAGTCTTGATATTGGATCCATCTAGTGTTGACAAAGAGAAATTTGGTCACAAGAGGAAGAGAGAATCTATGTCAGAATTGCTAATTTGGATTAACAGCATTGCTAAAAATCCTTGTGATCCTGCAGTTGGTTCGATTCCTGAGAAGTCCAAGTGGAAGTCATGCAGTAGTCAGGAGATCTGGAAGCAGGCTTTGTTGTTTCGAGAAGCAGTCTTTCTGAAGAAAGATTTCGAGACAGTCAGTGAACAACTTAGTTGGCAGAGTCAGAAAATGCATCCTTTCATGTATGATGATCGCGCTGGGGCATTGTACAATTTTAGACAGAGGTTGAAATGTGATGAGAGGTCTTTATTGGTAAAATCTACATCTGATGGAGTCGTCTCCTCTTCTTCGTCTAGAACAAGAACACGTGGAGGTTTGGAGAGAACCCGGAGTGCTCGAGCTGAAGATCGGGTGGACAAAAAGTTACTCGAATCGTGTACTGCACTCTCGAGTCTTGATAAATGTGCTCGAGTGCACATCCCTGTGGGGCCAAATCATCAAGCTGAAGTGCCAAAATGGACTGGCATGACTTGTGAGAGTGATTCTAAGTGGTTGGGGACAGAAATATGGCCTCCAAAAGTTGTAAATTCTAGATGGTGTATTGTTGAAAGGGACCCCATTGGAAAAGGAAGGCAGGATTCATGTGGGTGCCCAGTACAAGGTTCTGTTGAGTGTGTCCGGTTTCACGTTGCTGAGAAAAGGTCTAAAGTTAAAATGGAACTGGGTGAGGCTTTTTTCCAATGGAATTTAGACAAGGTAGGTGAAGAAGTTAGGAGTTCTTGGACAGATCAAGATGAGAAGAAGTTCAAGGATGTGGTGAAATCAAACCCTGCTTCACTTGATAAATGTTTTTGGGATCATCTCTTTAAAACATTTCCTAAGAAGAGCAGAGAAGATTTGGTCAGCTACTATTTCAATGTCTTTCTTCTGCAGCAGAGAGCATATCAGAATAGGCATACTCCAGATAACATTGATAGTGATGATGATGAATCAGAATTCACACCATTGAGGAAAGTGTTTGGACATCATACACCAAAATCACGCAGCCTCACCTTGTTATCACCCAAAAAATCCACAGGCAAAAGGGAAAATAGCAAGTGA 1866 0.4314 MMGNGEPLDLYKLFMVVKKKGGFDAVCKNRLWDLVGEEYGLGVKVGSSVELIYSKHLSTLETCLKNVAGGKFAECGLEDRVKFHKHLMKAHTESVLDDSGGEEAGDELERRECGCPDGRKFSGSNRVKCVKPVSNGVEHESAYEYLGGSKSCGSNSMKDKKSGPIGDEFDNVCDYLEERKLCGTNRVNGVNPDSNAAKKVRRSGLRLVDLDMLEDHETESDMLRLSDGSKSSNKDNDDGSDEVLILDPSSVDKEKFGHKRKRESMSELLIWINSIAKNPCDPAVGSIPEKSKWKSCSSQEIWKQALLFREAVFLKKDFETVSEQLSWQSQKMHPFMYDDRAGALYNFRQRLKCDERSLLVKSTSDGVVSSSSSRTRTRGGLERTRSARAEDRVDKKLLESCTALSSLDKCARVHIPVGPNHQAEVPKWTGMTCESDSKWLGTEIWPPKVVNSRWCIVERDPIGKGRQDSCGCPVQGSVECVRFHVAEKRSKVKMELGEAFFQWNLDKVGEEVRSSWTDQDEKKFKDVVKSNPASLDKCFWDHLFKTFPKKSREDLVSYYFNVFLLQQRAYQNRHTPDNIDSDDDESEFTPLRKVFGHHTPKSRSLTLLSPKKSTGKRENSK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00888 621 SMART bright_3 2 66 IPR001606 GO:0003677
Phac8g00888 621 MobiDBLite consensus disorder prediction 574 621 - -
Phac8g00888 621 Pfam ARID/BRIGHT DNA binding domain 4 60 IPR001606 GO:0003677
Phac8g00888 621 ProSiteProfiles ARID domain profile. 1 65 IPR001606 GO:0003677
Phac8g00888 621 SUPERFAMILY ARID-like 4 71 IPR036431 GO:0003677
Phac8g00888 621 SMART ELM2_2 415 467 IPR000949 -
Phac8g00888 621 CDD ARID 4 61 - -
Phac8g00888 621 Gene3D - 1 70 IPR036431 GO:0003677
Phac8g00888 621 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 1 614 - -
Phac8g00888 621 MobiDBLite consensus disorder prediction 575 594 - -
Phac8g00888 621 CDD SANT 515 563 IPR001005 -
Phac8g00888 621 MobiDBLite consensus disorder prediction 219 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00888 Phac-Chr8 5832590 5837168 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Phac8g00888 ARID 6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00888 - - vun:114182925 1028.47