Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00853 ATGGTGTCCCTCAACTCAAACCCCCCTCAAACTTTTCCCTTCTTAGACCCCTTTGACATGGAGGATCCCAATAAGAAGGTTCGAAAACCTTACACCATTACCAAGTCAAGAGAGAACTGGACGGACCAAGAGCATGACAAGTTTCTCGAAGCTCTTCACTTATTCGACCGTGACTGGAAGAAGATTGAAGCATTTGTGGGTTCAAAAACAGTTATCCAGATAAGGAGTCATGCGCAGAAGTATTTCATGAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGTCCGAAAAGAAAAGCTGCTCATCCATACCCACAAAAGGCTTCTAAAAATGCTCTCACTATATCCAAAGTTACGAGGCCTTTGCAATCTTCATCTGCTTTGTCGGAATCATCATACATTTATAGGCCAGACCCATCATCTGTGCTTAGAACTGCAGTTAGCAGTGTGCCATTGTCATCTTGGGGTTATAATCTTACGCCACAAGTTGGTCCTCCTGAAGTGACAAAAGCAATGCCAGATTTTCCAGAAGTATATAGCTTCATCGGAAGTGTGTTTGATCCAAATGTGACTAATCATTTACAAACACTGCAACAGATGGACCCAATAAATGTGGAAACCGTATTGCTGTTGATGAGAAACCTCTCCACCAATTTAAGGAGTCCTGAGTTTGAGAATGAAAGAAGGATGCTGTCATTGTACAATGCTAACTCGGAGAGAACAAAATCATCTCAGCCATCTTTAACTGACAGATCAGAGAGTGTTATCCTATCTGCTTAA 789 0.4208 MVSLNSNPPQTFPFLDPFDMEDPNKKVRKPYTITKSRENWTDQEHDKFLEALHLFDRDWKKIEAFVGSKTVIQIRSHAQKYFMKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNALTISKVTRPLQSSSALSESSYIYRPDPSSVLRTAVSSVPLSSWGYNLTPQVGPPEVTKAMPDFPEVYSFIGSVFDPNVTNHLQTLQQMDPINVETVLLLMRNLSTNLRSPEFENERRMLSLYNANSERTKSSQPSLTDRSESVILSA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00853 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 86 IPR017930 -
Phac8g00853 262 CDD SANT 39 82 IPR001005 -
Phac8g00853 262 Gene3D - 39 87 - -
Phac8g00853 262 Pfam Myb-like DNA-binding domain 37 82 IPR001005 -
Phac8g00853 262 NCBIfam myb-like DNA-binding domain, SHAQKYF class 35 84 IPR006447 GO:0003677
Phac8g00853 262 PANTHER SWI/SNF COMPLEX-RELATED 20 234 - -
Phac8g00853 262 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Phac8g00853 262 MobiDBLite consensus disorder prediction 87 110 - -
Phac8g00853 262 MobiDBLite consensus disorder prediction 241 262 - -
Phac8g00853 262 FunFam protein REVEILLE 6 isoform X1 39 87 - -
Phac8g00853 262 SMART sant 36 84 IPR001005 -
Phac8g00853 262 ProSiteProfiles SANT domain profile. 35 88 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00853 Phac-Chr8 5591552 5597202 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phac8g00853 Myb_DNA-binding 3.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00853 - - gmx:100791774 414.461