Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00845 ATGGCCGAAGATTGGGATCTACATGCGGTGGTCAGAGGTTGCTCCACCATCACATCATCCTCCGTGTCTTCTTCTTCCTCCTCCTCCTCTGGTTTTGCCTCTTGTTACTTCCACCCTGAAGGTGTTTCCTCCTCGTCTTCTTCTTCTTCTGGCTTCTCTATCTTCAGAGGTGAACAAGGAAGCCAAGTTTTGTCGCTTTCTGCGTACCCCTTTGAGGTAAGGAGCCCCATTGAAGAGCTGCATGAGCTTTGCAGGCCTTTCTTCTCCAAAGTTCAGCCTCTGTCGTTGCAAGCCTCTTCCCCCTTGTCCTCACTCTCTTCTTATTCCTCTGCGCCTCCCAAAACGCTTTCACCTCAAGAGAAGCAACAACAACAGCGGAACAAGCAGCCACACTCTGTCACCACCCCACGATCTAAAAGAAGGAAGAACCAGCTTAAGAAAGTTTGTCAAGTGCCGTTTGAAAATCTCTCCTCAGACATATGGGCATGGAGAAAATATGGCCAGAAACCCATAAAGGGGTCTCCTTATCCAAGGGGGTACTACAGATGTAGCAGCTCAAAGGGGTGTTTGGCAAGGAAACAGGTTGAGAGGAACAGATCAGACCCAACAATGTTCATAGTGACTTACACAGCTGAGCACAACCATCCTGCTCCTACTCACAGAAACTCTCTTGCTGGCTCCACACGCCAGAAGCCATTGGCACCCCAGACTGCCACCACTGAACAAGACTCTGACAAGAGCAAAAGCCTAACAAAACCCTCTTCCCCTGCCACCTCAGGGACAGAGGAAGAGGTTCCAGCACAAGGGGAAAAATCTGAGAGCAGAGAAGAGAAAGATGATGTGATGGATGATGAGGAAGAAGATGAATTTGTTTTGTCAGACATGGTGCTAACAGATGATTTCTTTGAGAGCTTGGATGAGCTGAGTCAACTCACTGCCCCTTCTGTTGTCACAGGAGACTGCTTCAGTGACCCCTTTTCAGCTATTGCAATCCCTTCTTGGGTGGCTAGTGGTGCTGCTACTGCTGGTGGATGCATATGA 1041 0.4909 MAEDWDLHAVVRGCSTITSSSVSSSSSSSSGFASCYFHPEGVSSSSSSSSGFSIFRGEQGSQVLSLSAYPFEVRSPIEELHELCRPFFSKVQPLSLQASSPLSSLSSYSSAPPKTLSPQEKQQQQRNKQPHSVTTPRSKRRKNQLKKVCQVPFENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTAEHNHPAPTHRNSLAGSTRQKPLAPQTATTEQDSDKSKSLTKPSSPATSGTEEEVPAQGEKSESREEKDDVMDDEEEDEFVLSDMVLTDDFFESLDELSQLTAPSVVTGDCFSDPFSAIAIPSWVASGAATAGGCI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00845 346 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 311 IPR044810 GO:0003700
Phac8g00845 346 MobiDBLite consensus disorder prediction 105 146 - -
Phac8g00845 346 Gene3D WRKY domain 141 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00845 346 MobiDBLite consensus disorder prediction 215 262 - -
Phac8g00845 346 FunFam WRKY transcription factor 22 141 211 - -
Phac8g00845 346 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00845 346 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00845 346 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00845 346 SUPERFAMILY WRKY DNA-binding domain 155 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00845 346 MobiDBLite consensus disorder prediction 105 132 - -
Phac8g00845 346 MobiDBLite consensus disorder prediction 212 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00845 Phac-Chr8 5493531 5495817 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00845 1 346 WRKY Transcription Factor Family AT4G01250 47.606 1.51e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g00845 WRKY 3.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00845 K13425 - gmx:100798084 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00845 8 5493531 5495817 Phac7g01151 7 7241470 7243256 ECH
Phac8g00845 8 5493531 5495817 Phac8g00845 8 5493531 5495817 ECH
Phac10g01314 10 35724001 35725788 Phac8g00845 8 5493531 5495817 ECH
Phac10g01931 10 41587764 41594157 Phac8g00845 8 5493531 5495817 ECH
Phac8g00845 8 5493531 5495817 Phac10g01314 10 35724001 35725788 PCT