Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00841 ATGCACATTCTCTTTATAAGTTTCAACGCCAAAATATTCTCATTTTCTCCTTCATTGTGGAACCAAGACCTAATGGAAGGCCATGACCCACCACCCCAAAGCAACCCTTTTCTCTTCACGCCTAATTCGGGGCTGCAGAACCCTTTGGAACCTCCAGAGCAAGGGCTACGTGACTTTGAGTGGGGTAACCTTTTCTCTGCCCAAAACAGGTTCTTGTTGGAAAGTGTTGAATGTGCTGCTTCTTCCTCTTCGCCTTTTATGGCTCAGAATAAGGTAGTTTGCGAGGAGGAAAAGGGAAACCAGGAGAAAAGGAAAGGTGGGAGGGTGAAGAAAGCAACACGAGTGCCCAGGTTTGCTTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGCTATCGCTGGAGGAAATATGGACAGAAAGCTGTGAAGAATAGCACATATCCCAGAAGCTACTACCGGTGCACGCATCACACATGCAACGTGAAGAAACAAGTGCAAAGGCTGTCAAAAGACACAAGCATTGTGGTGACAACATACGAGGGAATTCACAACCATCCATGCGAGAAGCTCATGGAAACTCTAACCCCTCTTCTCAACCAAATACACTTTCTTGCTAGCTTGTAA 627 0.4561 MHILFISFNAKIFSFSPSLWNQDLMEGHDPPPQSNPFLFTPNSGLQNPLEPPEQGLRDFEWGNLFSAQNRFLLESVECAASSSSPFMAQNKVVCEEEKGNQEKRKGGRVKKATRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLNQIHFLASL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00841 208 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00841 208 Gene3D WRKY domain 114 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00841 208 FunFam WRKY transcription factor 57 115 189 - -
Phac8g00841 208 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00841 208 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 30 190 IPR044810 GO:0003700
Phac8g00841 208 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00841 208 SUPERFAMILY WRKY DNA-binding domain 122 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00841 Phac-Chr8 5470958 5474534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00841 102 208 WRKY Transcription Factor Family AT5G41570 71.963 6.21e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g00841 WRKY 2.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00841 - - gmx:100127398 314.309