Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00828 ATGGAGCTTCTTCACAACCTCAACACTCTCACTACAATTCTTCTTCTATGCATGTTCCCTCACTCACTCAAGTGCCAACAAGCATACCTCAATGCCACTGTCTATGACTGTTCTGACAACCCTTCTGCACCAAAAGGGTACCTTTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTACTTTTCAGGTCAAAACCTCCCTATGATAGCCCTGAAAGAATTGCCTACCTTCTTGGATCTGAGGCATCTACCATAGCCTCAGTTAACAAGATCTCAAGACATGACAAGATTGCTTCCAACAAGACAATCATTGTTCCTGTTTTCTGTTCATGTTCAGGAAACATCTACCAGCATAACACACCTTACACTGCCACCAAGAATGACACCTATTTTCAGTTGGTAAAAGAAACCTTCCAAGGCCTTACTACCTGTCAGGCACTGATGGGTCAGAATTACTATGCAGCTACCAAAATTGAAATTGGTGCTGAGCTCACAGTTCCGTTGTTATGTGCTTGTCCAACTGAAAATCAAACAGCAAGAGGGATCACTTCCTTGCTGGTTTACTTGGTGAACTATGGTGACGCTATTAAGTCCATAGCAAAGGCTTATGGTGTGGAAGAACAAAGTATACTTGAGGCCAATGAGTTGGTTGTGCCACAAAGTGAAAACAGCAGAATCACTCTCCTTTCCTTGACACCTCTTTTAGTTCCTCTAATAGGGAAGAGCTGCAAAGAGAACCCAGATAAATTCTATTGTAAATGTTATCAAGCACCAGATAGAAGCACCAAGGGGCCCTTCTGTGATGAATCTGATGATCAGAAATTCCCTGCCAAGTTGCTAGCCGCTTTAGGAGCAGGACTTGGCGTAGGCTTTCTCTGTTTGTTTCTTTTGGGGTACAAATCATATCAATATATACAGAAAAAGAGAGAAAGTATCCGCAAGGAAAACCTATTCAGGCAAAATGGTGGCTACTTGTTACAGGAGAAGCTCTCATCTTACGGAAATGGAGAAATGGCAAAGCTTTTTGCAGCTGAGGAACTACAAAGAGCAACAGATAACTACAACAGGAGTAGGTTTCTTGGTCAGGGTGGCTATGGCACAGTGTACAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAGGTCCAAAGAAATTGAAAGGAACCAGATAGAGACTTTTGTCAATGAAGTTGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTATTAGGTTGTTGTCTCGAGACAGAAACTCCTTTACTAGTCTATGAATTCATTTCCAATGGAACTCTCTCTCACCATATCCACAGGAGAGACAATGAACCCTCCCTTTCATGGGAGAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTGCAGCTTCTATTCCCATTTTTCATAGAGACATCAAACCTACCAACGTGCTTTTAGACAGCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGACAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTAAGTTTTCAGATAAAAGTGATGTGTATAGTTTTGGGGTGGTGCTAGTAGAGCTCATAAGTGGGAGAAAGCCAATTTCATTCTTAGAGGAAGATGAGGGTCAGAATCTGATTGCACAGTTTCTTTCTCTGATGAAGGAGAACCAGGTTTATGAAATTTTAGATGGAAGGGTAGCTAAGGAAGCAAGGAAAGATGACATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGGCCAACAATGAAGGAGGTTTCACTGGAACTAGAAGCATTGAGAAAGGTGCAAAGTTCCTTACAGATCAACCATGATCATGAGCACAAAACTAGTGATATGGTTGAAGAGTGCACAGAGGAAAGCATGTCACTAGACATGTTCATGGAGTTTCATCTTTACCTTTACATTCTCTACACAATCATGTTCTTACATATGTTTCCAGAATCAGCTAACTGTCAACAAGCATACCTCAACAGCACTGTCTATGACTGCTCTGAGAACCCTTCTGCATCAAAAGGATACCTGTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTAGTTTTCAGGTCCAAATCTCCCTATGACAACCCTGTAAGCATTGCCTACCTTCTTGGCTCTGAAGCATCTACCATAGCCTCAATCAACAACATCTCAAGAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTATTCTGTTCATGTTCTGGAAATATCTACCAGCATAACACACCTTACACTGCCACCAAGAATGACACCTACTTCAAGTTGGTTACAGAAATTTACCAAGGCCTCACCACCTGCCAGGCACTGATGGGTCAGAATTACTATGCCTCTGGTGACATTAGAGTTGGTGCTGAGCTCACAGTTCCAGTAGTATGTGCTTGTCCCACTGAAAGTCAGACAGCAAGAGGGGTCACTTCCTTGCTGGTTTATTCAGTGAATAATGGTGATACTGTTAAGTCCATTGGAGAGGCTTATGGTGTTGATGAACAAAGTATGCTAGAGGCCAATGGGTTGTCAGTGTCGCCAAATGCAGAGAACATCATCATCATCTATGCCACAACTCCTATCTTGGTTCCTCTCAGAGGGAAGAGTTGCAAAGAGGACCCGAATAGTTTCTATTGTACTTGCTCCGAGGGAAGGGTTGAGGTTGGAACCTTCATGGGGTTCCAATGTAATGAATCTGATGATAAAAGTTTTCCTACCAAATTGGTTGCTTCTTTAGGTGTTGGAATTGGCGCAGGCTTTGTGTGTTTGTTTCTTTTGGGATACAAATCATATCAGTATATCCAGAAAAGGAGAGAAAGTATTCGTAAGGAAAGCTTATTCAGGCGAAATGGTGGATACTTGTTACAAGAGAAGCTCTCTTTTTATGGAAATGGAGAAATGGCAAAGCTGTTTAAAGCTGAGGAGCTACAGAAAGCAACAGATAACTATAACAAGAGTAGATTTCTTGGTCAGGGTGGCTTTGGCACTGTGTATAAAGGAATGCTACCAGATGGGACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGAAACCAGATAGAGACTTTTGTGAATGAAGTGGTGATTCTATCCCAGATCAACCACAGGAACATTGTCAAACTCTTTGGTTGTTGTCTTGAGACAGAAACTCCTTTATTGGTCTATGAATTCATTCCCAATGGAACACTCTCACACCATATCCACAGGAGAGACAATGAGCCCTCCCTTTCATGGGAGACTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTTACATATATGCATTTTTCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCTACCAACATACTTTTAGACACCAACTTCAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTGCCACAAGATAAGACTCACTTGACCACAGCTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAATTTTCAGATAAAAGTGATGTGTATAGTTTTGGAGTTGTGCTCGTAGAGCTCATAAGTGGGAGAAAGCCAATTTCATTCTTAGAAGAAGATGAGGGTCAGAATCTGATTGCACAGTTTCTTTCTCTGATGAAGGAGAACAGAGTTTATGAAATTTTAGATGGCAGGGTGGTTAAGGAAGCAAGGAAAGATGAGATTCTTGCCATTGCAAACCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAAGTTTCAGTGGAATTAGAAGCATTGAGAAAGGTGCAAAGTTCCTTAGAGATCAACCATGATCATGAGTACACAACAAGTGACACAGTTCAAGAATTCACAGTTGAAAGCATGCCACTGTGTTTAGAACTAGACTCCACATCATTTTAG 3993 0.4145 MELLHNLNTLTTILLLCMFPHSLKCQQAYLNATVYDCSDNPSAPKGYLCNGLQKSCTSFLLFRSKPPYDSPERIAYLLGSEASTIASVNKISRHDKIASNKTIIVPVFCSCSGNIYQHNTPYTATKNDTYFQLVKETFQGLTTCQALMGQNYYAATKIEIGAELTVPLLCACPTENQTARGITSLLVYLVNYGDAIKSIAKAYGVEEQSILEANELVVPQSENSRITLLSLTPLLVPLIGKSCKENPDKFYCKCYQAPDRSTKGPFCDESDDQKFPAKLLAALGAGLGVGFLCLFLLGYKSYQYIQKKRESIRKENLFRQNGGYLLQEKLSSYGNGEMAKLFAAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKRSKEIERNQIETFVNEVVILSQINHRNIVKLLGCCLETETPLLVYEFISNGTLSHHIHRRDNEPSLSWESRLRIACEVAGAVTYMHFAASIPIFHRDIKPTNVLLDSNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSKFSDKSDVYSFGVVLVELISGRKPISFLEEDEGQNLIAQFLSLMKENQVYEILDGRVAKEARKDDILAIANLAMRCLRLNGKKRPTMKEVSLELEALRKVQSSLQINHDHEHKTSDMVEECTEESMSLDMFMEFHLYLYILYTIMFLHMFPESANCQQAYLNSTVYDCSENPSASKGYLCNGLQKSCTSFLVFRSKSPYDNPVSIAYLLGSEASTIASINNISRDDKIPSNKSIIVPVFCSCSGNIYQHNTPYTATKNDTYFKLVTEIYQGLTTCQALMGQNYYASGDIRVGAELTVPVVCACPTESQTARGVTSLLVYSVNNGDTVKSIGEAYGVDEQSMLEANGLSVSPNAENIIIIYATTPILVPLRGKSCKEDPNSFYCTCSEGRVEVGTFMGFQCNESDDKSFPTKLVASLGVGIGAGFVCLFLLGYKSYQYIQKRRESIRKESLFRRNGGYLLQEKLSFYGNGEMAKLFKAEELQKATDNYNKSRFLGQGGFGTVYKGMLPDGTIVAVKKSKEIERNQIETFVNEVVILSQINHRNIVKLFGCCLETETPLLVYEFIPNGTLSHHIHRRDNEPSLSWETRLRIACEVAGAVTYMHFSASIPIFHRDIKPTNILLDTNFSAKVSDFGTSRSVPQDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELISGRKPISFLEEDEGQNLIAQFLSLMKENRVYEILDGRVVKEARKDEILAIANLAMRCLRLNGKKRPTMKEVSVELEALRKVQSSLEINHDHEYTTSDTVQEFTVESMPLCLELDSTSF* 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00828 1330 CDD STKc_IRAK 1023 1290 - -
Phac8g00828 1330 FunFam Wall-associated receptor kinase 2 430 647 - -
Phac8g00828 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Phac8g00828 1330 FunFam Wall-associated receptor kinase 2 1093 1310 - -
Phac8g00828 1330 FunFam Wall-associated receptor kinase 2 988 1092 - -
Phac8g00828 1330 Gene3D Phosphorylase Kinase; domain 1 325 429 - -
Phac8g00828 1330 Gene3D Phosphorylase Kinase; domain 1 989 1092 - -
Phac8g00828 1330 ProSitePatterns Protein kinases ATP-binding region signature. 1023 1046 IPR017441 GO:0005524
Phac8g00828 1330 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00828 1330 SMART serkin_6 1017 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00828 1330 FunFam Wall-associated receptor kinase 2 325 429 - -
Phac8g00828 1330 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 760 1294 IPR045274 GO:0007166
Phac8g00828 1330 SUPERFAMILY Protein kinase-like (PK-like) 338 624 IPR011009 -
Phac8g00828 1330 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00828 1330 Pfam Protein kinase domain 1017 1283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00828 1330 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Phac8g00828 1330 Gene3D Transferase(Phosphotransferase) domain 1 1093 1315 - -
Phac8g00828 1330 ProSiteProfiles Protein kinase domain profile. 1017 1306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00828 1330 Pfam LysM domain 188 219 IPR018392 -
Phac8g00828 1330 Pfam LysM domain 849 878 IPR018392 -
Phac8g00828 1330 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Phac8g00828 1330 SMART LysM_2 67 106 IPR018392 -
Phac8g00828 1330 SMART LysM_2 782 828 IPR018392 -
Phac8g00828 1330 SMART LysM_2 121 167 IPR018392 -
Phac8g00828 1330 SMART LysM_2 848 898 IPR018392 -
Phac8g00828 1330 SMART LysM_2 728 767 IPR018392 -
Phac8g00828 1330 SMART LysM_2 187 237 IPR018392 -
Phac8g00828 1330 Pfam Protein tyrosine and serine/threonine kinase 358 622 IPR001245 GO:0004672|GO:0006468
Phac8g00828 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1138 1150 IPR008271 GO:0004672|GO:0006468
Phac8g00828 1330 SUPERFAMILY Protein kinase-like (PK-like) 1001 1287 IPR011009 -
Phac8g00828 1330 CDD STKc_IRAK 360 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00828 Phac-Chr8 5365425 5371778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00828 274 628 Receptor kinase-like Gene Family AT1G16130 57.423 3.29e-135 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Phac8g00828 Pkinase 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00828 - - minc:123203463 1494.18