Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00807 ATGGTTTCCCTGTCAACCACCACTCCCCTTTTCCCCTTCACTGCACAAAGCGCTTCCACCGGAATCCCTCCTCCCAATTCCTTCCGTTACAGCAAGCGACGTGTTAGGGATCACAGGAAGGTTGTCTGCGCCTGCATCGCACCTCCGCAGAACTTCAAGAGCCAGGACTCTTCCCCTATTAATTTCAATGGTTTGCACAAATCAGAACAGATGAGCGGGGCGCGGGATCGCGATGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTGTACAAATCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGTAAATCTACAGTTTTGAAGATTATTGCAGGACTTCTTGCTCCGGACAGGGGGGAAGTTTACATTCGAGGAAAAAAGAGGGTTGGTTTAGTAAGCGATGATGACATATCTGGTCTTCGGATTGGATTAGTTTTCCAAAGTGCCGCACTCTTTGATTCCATGAGTGTTCGTGAAAATGTTGGTTTTCTCTTGGATGAACACTCGAGCATGTCTAAGGACCAGATATCAGAGCTTGTCAAGGAAACCTTGGCTGCTGTTGGATTGAAGGGAGTTGAAGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATCTGTGACACCACAAAGGAATCAATTGAACCAGAGGTGCTTTTATATGACGAACCAACTGCTGGACTTGATCCTATTGCATCTACTGTTGTTGAGGATCTGATTCGCTCAGTGCACATAAAAGGACGAGATGCTCGTGGAAAACCTGGGAATATTGCATCTTATGTAGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAGGGAACGATTGTTTGGGAAGGAATGACTCATGAGTTTACAACTACAACAAATCCAATTGTTCAGCAGTTTGCATCCGGGAGCCTAGATGGTCCTATCAGATATTAG 1038 0.4441 MVSLSTTTPLFPFTAQSASTGIPPPNSFRYSKRRVRDHRKVVCACIAPPQNFKSQDSSPINFNGLHKSEQMSGARDRDDDSDVLIECRDVYKSFGEKKILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLAPDRGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSMSVRENVGFLLDEHSSMSKDQISELVKETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTKESIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGTIVWEGMTHEFTTTTNPIVQQFASGSLDGPIRY* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00807 345 Gene3D - 72 337 IPR027417 -
Phac8g00807 345 Pfam ABC transporter 100 255 IPR003439 GO:0005524
Phac8g00807 345 MobiDBLite consensus disorder prediction 57 78 - -
Phac8g00807 345 SMART AAA_5 109 313 IPR003593 GO:0016887
Phac8g00807 345 CDD ABC_Org_Solvent_Resistant 85 334 - -
Phac8g00807 345 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Phac8g00807 345 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 26 345 - -
Phac8g00807 345 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 336 IPR003439 GO:0005524
Phac8g00807 345 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00807 Phac-Chr8 5266740 5271633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00807 84 314 Calmodulin-binding Proteins AT2G36910 29.555 6.75e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00807 - - vum:124836515 624.78