Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00748 ATGGGGTCTATGAACTTGTTGGGGTTTTCTCTCTCCCCTCAAGAACACCCTTCTAGTCAAGATCACTCTCAACCGGCACCTTCTCGTTTTGGCTTCAACCCTGATGGAATCTCAAGCACTGATGTTGCAGGAGACTGTTTTGATCTCACTTCTGACTCAAATCCTCATTTACTCAACCTTCCTTCTTATGGCATATATGAAGCATTTCACAGAAACAATAGCATTCACACCACTCAAGATTGGAAGGAGAACTACAACAGTCAAAACTTGCTACTGGGAACTTCATGCAGTAACCAAAACATGAACAACAATCAACATCAACAACAACAGCCAAAGCTTGAGAACTTTCTGGGTGGACATTCATTTGGAGAACATGACCAAACCTACGGTGGTAACTCATCCTCAACAGATTACATGTTTCCGACTCAGCCAGTAGCAACCAGTGGGGGCAGTAGCACAAGCAATAGCATAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCTCACTCAGAAAAAAACAATGAAAGTGCTGGGAACAGTGGTAGTGTGCAGACTCTATCACTTTCTATGAGTACTGGTTCACAATCTAGCACTTCACTTCCCGTTCTCTCTGCAAGTGTGGAAAATGGAGAGAGTTCTTCAGATAACAAACAACCAGTAACCACTGCTGCACTTGATAGCACCCCAACAGGAGCCACTGAATCTGCACCCAGAAAGTCCATTGACACTTTTGGACAAAGAACTTCTATATACCGTGGTGTAACAAGGCATAGGTGGACTGGGAGGTACGAGGCTCATCTGTGGGATAACAGCTGTAGAAGAGAGGGACAAACTCGCAAAGGAAGGCAAGAGACACTGTCAATCTATGTTCCTCATCTCCACATCCACTATGGGATAATGGCTTTCTTCAACATACATGACCTTTTAGTTTACTTGGGAGGTTATGACAAAGAAGAAAAGGCAGCTAGAGCCTATGATTTGGCAGCACTAAAATACTGGGGAACAACTACAACAACAAATTTTCCTATTAGCCACTATGAGAAAGAGGTGGAAGAAATGAAGCACATGACCAGACAAGAGTACGTTGCTTCATTGAGAAGGAAGAGTAGTGGGTTCTCTCGCGGTGCATCCATTTATCGAGGAGTAACAAGACACCATCAACATGGTAGATGGCAAGCAAGGATTGGGAGGGTTGCAGGCAACAAGGATCTCTACTTGGGAACATTCAGCACTCAAGAAGAAGCAGCAGAGGCTTATGATGTTGCGGCGATCAAATTCCGAGGACTGAGTGCTGTTACAAACTTTGACATGAGCAGATATGATGTGAAGAGCATACTCGAGAGCACTACTTTGCCCATTGGTGGTGCTGCCAAGCGTTTGAAGGATATGGAACATGTGGAACTGAACGTGGAAGCTCATAGAACAGACCAAGAAGATCATAGCAGCAACATCTTGAACACTCACCTAACTCAAGGAATCAGTAATAACTATGCAGGAGGAACAACTCATCATCATAACTGGCACAACACTCTTTCATTTCACCAACCTCAACCTTGCACCACCATACACTACCCTTATGGACAGAGACTATGGTGCAAGCAAGAACAACAAGACAATTCTGATACCTCTCACCCTTTGTCTTATCCTGATATTCATCAACTACAGCTAGGGAATAATGGCACACACAACTTTTTCCACACAAGTTCCGGGTTGCACCCTATCATGAACATGGATTCTGCTTCCATTGACAACAGCTCTTCATCTAACTCGGTAGTTTATGATGGTTATGGAGGAGGTGGGGGCTATGTGATGCCTATGGGTGCTACTACTGTTGTTGCAAGTGATGGTGATCATAATCAAAGAGGCAATCATGGTTTTGGTGACAATGAGATGAAGGGACTTAGTTATGAAAGTGTTTATGGATCTAATGATGCTTATCATGCACATGCAAGGAACTTGTATTATCTTTCCCAACAGCAATCATCTTCTGTGGATGCAGTGAAGGCTAGTGCATATGATCAAGGAGGTTCTGCATGCAACACTTGGGTTCCAACTGCTATTCCAACGCTTGCACCAAGGTCTACCAGTATGGCTCTATGCCATGCTGCTCCACCCTTCTCGTTATTGCATGAATAG 2145 0.4401 MGSMNLLGFSLSPQEHPSSQDHSQPAPSRFGFNPDGISSTDVAGDCFDLTSDSNPHLLNLPSYGIYEAFHRNNSIHTTQDWKENYNSQNLLLGTSCSNQNMNNNQHQQQQPKLENFLGGHSFGEHDQTYGGNSSSTDYMFPTQPVATSGGSSTSNSIGLSMIKTWLRNQPPHSEKNNESAGNSGSVQTLSLSMSTGSQSSTSLPVLSASVENGESSSDNKQPVTTAALDSTPTGATESAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQETLSIYVPHLHIHYGIMAFFNIHDLLVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEHVELNVEAHRTDQEDHSSNILNTHLTQGISNNYAGGTTHHHNWHNTLSFHQPQPCTTIHYPYGQRLWCKQEQQDNSDTSHPLSYPDIHQLQLGNNGTHNFFHTSSGLHPIMNMDSASIDNSSSSNSVVYDGYGGGGGYVMPMGATTVVASDGDHNQRGNHGFGDNEMKGLSYESVYGSNDAYHAHARNLYYLSQQQSSSVDAVKASAYDQGGSACNTWVPTAIPTLAPRSTSMALCHAAPPFSLLHE* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00748 714 Pfam AP2 domain 381 431 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 Gene3D AP2/ERF domain 253 347 IPR036955 GO:0003700|GO:0006355
Phac8g00748 714 Gene3D AP2/ERF domain 381 441 IPR036955 GO:0003700|GO:0006355
Phac8g00748 714 MobiDBLite consensus disorder prediction 1 27 - -
Phac8g00748 714 SUPERFAMILY DNA-binding domain 309 347 IPR016177 GO:0003677
Phac8g00748 714 ProSiteProfiles AP2/ERF domain profile. 253 345 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 CDD AP2 380 441 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 CDD AP2 252 347 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 ProSiteProfiles AP2/ERF domain profile. 381 439 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 SMART rav1_2 253 351 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 SMART rav1_2 381 445 IPR001471 GO:0003700|GO:0006355
Phac8g00748 714 MobiDBLite consensus disorder prediction 168 244 - -
Phac8g00748 714 FunFam AP2-like ethylene-responsive transcription factor 380 441 - -
Phac8g00748 714 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 103 536 - -
Phac8g00748 714 MobiDBLite consensus disorder prediction 126 154 - -
Phac8g00748 714 MobiDBLite consensus disorder prediction 117 154 - -
Phac8g00748 714 MobiDBLite consensus disorder prediction 1 35 - -
Phac8g00748 714 SUPERFAMILY DNA-binding domain 380 441 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00748 Phac-Chr8 4859298 4864151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00748 111 466 AP2-EREBP Transcription Factor Family AT5G17430 61.517 3.08e-134 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g00748 AP2 2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00748 K09285 - gmx:100797584 1118.22