Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00730 ATGGAAGACTATGATGCTGTGTTGAGTGAGAGCAATGGTTCATTTGATGAGCAACAGTTCCTAAGAGAGATCCTTGAGGAGCCACAAAATTTGTCACCTCAAGGAGAGAATCTCAGTCCCACCAACAGCAGTGTGTCCTTTGATGAGCCAATTGGTGACACTCTCCACAAAAGCTACAGTTCCAACTCCATCAAGTCCCTGAAAACATTGCCACCATCATCACACACCACATACCTTCTCTCTTTTGATACTTCATCTGCTGAACCAATCATTCCTCATAAGCTTTCCCCAAAGCTTGGCTCATCACTGCAGGGATCTTCCAGCAAAAGGGGTGCTGTAGTGAAAGATGGAGCTGATGAATTTGAACCATTCATGGATCAGCCAAGAAAGAGGGTCAGAAGGCCCTCTGAGACACAACATCACATCATTGCTGAGAGGAAAAGGAGACAGGAACTGACAGGGAGCATCATAGCACTTTCAGCAACCATTCCTGGACTCAAAAGGATGGACAAGGCTTATGTACTTCGTGAAGCTGTGAATTACACAAGGCAACTTCAAGAGAGAGTAAAAGAGTTGGAAAATCAAAACAATGACACAAGAGTAGTGCATCATTCATCAACATTGGTAAGGAAATCTCAAGCCTCCTCAAATAAAAACAGCAGCAATGTTAGTGAAAGCAACAAAGAATCACTGTTTGAGGTTGAAGCAAGAGTTCTTGATGAGGAAGTACTCATTAGAATCCATTGTGAGAAGCAAAAGGACATAATCTGCAACATACTTGTCTTGCTTGAAAAGCTCCATCTTTCTCCAACCAGTAGCAGCGTGTTACCGTTTGGCACTTCTACTCTTATAATCCACATCATTGCTCAGATGGATGAGGAATGCAGAATGAGCACAGATGAGCTAGTGAAGAATCTGAGAGAATATCTTTTGGATGTGTATGACATGCAACAGTGA 957 0.4274 MEDYDAVLSESNGSFDEQQFLREILEEPQNLSPQGENLSPTNSSVSFDEPIGDTLHKSYSSNSIKSLKTLPPSSHTTYLLSFDTSSAEPIIPHKLSPKLGSSLQGSSSKRGAVVKDGADEFEPFMDQPRKRVRRPSETQHHIIAERKRRQELTGSIIALSATIPGLKRMDKAYVLREAVNYTRQLQERVKELENQNNDTRVVHHSSTLVRKSQASSNKNSSNVSESNKESLFEVEARVLDEEVLIRIHCEKQKDIICNILVLLEKLHLSPTSSSVLPFGTSTLIIHIIAQMDEECRMSTDELVKNLREYLLDVYDMQQ* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00730 318 MobiDBLite consensus disorder prediction 30 53 - -
Phac8g00730 318 Coils Coil 175 202 - -
Phac8g00730 318 MobiDBLite consensus disorder prediction 20 53 - -
Phac8g00730 318 MobiDBLite consensus disorder prediction 199 226 - -
Phac8g00730 318 MobiDBLite consensus disorder prediction 194 226 - -
Phac8g00730 318 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 138 204 IPR036638 GO:0046983
Phac8g00730 318 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 136 185 IPR011598 GO:0046983
Phac8g00730 318 SMART finulus 142 191 IPR011598 GO:0046983
Phac8g00730 318 Pfam Helix-loop-helix DNA-binding domain 139 186 IPR011598 GO:0046983
Phac8g00730 318 Gene3D - 127 201 IPR036638 GO:0046983
Phac8g00730 318 PANTHER BHLH TRANSCRIPTION FACTOR 26 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00730 Phac-Chr8 4712306 4715231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00730 95 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.986 1.18e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g00730 HLH 6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00730 - - gmx:100818334 356.681