Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00726 ATGGTAGAGGGTAGCCAAATTTTCAGTGCTCATGTTATTGTTAGTTTCTTTCTGCTGGTTCTCTGTGGCATGGTTTGTGGGACTGATAATGATATATCCTGCTTGAAAAGTGTAAAAGAGGCACTTCAGGACCCTTACAATTATTTGCAATCCTGGGATTTCAACAACAAAACAGAAGGGTATATATGCAGGTTCCCTGGGGTTGAGTGTTGGCACCCTGATGAGAATAGGGTCTTGAATCTGAAACTGTCGAACATGGGACTCAAGGGTGTGGTTGATGCAGCAAGTTATGCAAACAATTCTGGTTTGTGTGGTGCTCCCTTGGATCCTTGCCAGGCCAAGAGTCAAGCGAGAAACACTGCTGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTGTTGCAGCATTAGGTTTGGGCATTGGAATGTTCTTCTACGTGCGCCGTATTTCTTATAGGAAAAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTAAAGGGAACCAAAACAATAAAGGTTTCTATGTTTGAGAAGGCAATTTCAAAAATGAACTTGAATGATCTCATGAAGGCAACTAATAACTTCAGTAAAAGCAATATTATTGGGTCTGGAAGATCAGGAACTGTTTACAAAGCCGTCCTTCCTGATGGCACATCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTATGTCTGAGATGGCTATACTAGGGACTGTCAAACATGGTAACCTGGTTCCTCTTTTAGGTTTTTGTCTGGCAAAAAGGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTGCATCCTGATGAAGGCGTGTGCACCATGGATTGGGCTCTAAGGCTCAAAATTGCAATTGGGGCAGCCAAAGGGTTAGCATGGCTCCATCATAGCTGCAATCCCCGTATTATCCATCGAAACATAAGCTCTAAGTGCATCTTGTTGGACACTGATTTTGAGCCCAGAATTTCTGATTTTGGTCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTGGGTTATGTTGCTCCTGAATATGCAAAAACTTTGGTGGCTACTCCTAAAGGGGATATTTATAGCTTCGGGATCGTGCTTCTTGAGTTGGTCACAGGTGAAAGAGCAACTCATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTTGAATGGATTTCACAGCAATCTAGCAATGCAAAACTCCATGATGTCATTGATGAATCATTAGTTGGGAATGGAGTAGACCAGGAGCTTTTCCAATTTCTGAAGGTTGCATGCAATTGTGTTTCGGAAATGCCAAAGGAGAGGCCTACCATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGCATAAATTATAATTTCACAGCTGAGGATGAGATAATGCTGCCTGTAGAATCTGGTGACGCTGATAACTTAGAAGAACTTATTGTAGCTCGAGAGGGACATGATTGA 1530 0.4222 MVEGSQIFSAHVIVSFFLLVLCGMVCGTDNDISCLKSVKEALQDPYNYLQSWDFNNKTEGYICRFPGVECWHPDENRVLNLKLSNMGLKGVVDAASYANNSGLCGAPLDPCQAKSQARNTAVIAGAAVGGVTVAALGLGIGMFFYVRRISYRKKEEDPEGNKWARSLKGTKTIKVSMFEKAISKMNLNDLMKATNNFSKSNIIGSGRSGTVYKAVLPDGTSLMVKRLQESQHSEKEFMSEMAILGTVKHGNLVPLLGFCLAKRERLLVYKNMPNGTLHDQLHPDEGVCTMDWALRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDTDFEPRISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAKTLVATPKGDIYSFGIVLLELVTGERATHVAKAPETFKGNLVEWISQQSSNAKLHDVIDESLVGNGVDQELFQFLKVACNCVSEMPKERPTMFEVYQLLRAIGINYNFTAEDEIMLPVESGDADNLEELIVAREGHD* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00726 509 Gene3D Transferase(Phosphotransferase) domain 1 272 487 - -
Phac8g00726 509 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 88 474 - -
Phac8g00726 509 ProSiteProfiles Protein kinase domain profile. 197 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00726 509 FunFam Leucine-rich repeat receptor-like protein kinase 272 481 - -
Phac8g00726 509 SUPERFAMILY Protein kinase-like (PK-like) 174 473 IPR011009 -
Phac8g00726 509 CDD STKc_IRAK 203 471 - -
Phac8g00726 509 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 158 271 - -
Phac8g00726 509 Pfam Protein tyrosine and serine/threonine kinase 200 470 IPR001245 GO:0004672|GO:0006468
Phac8g00726 509 Gene3D Phosphorylase Kinase; domain 1 158 270 - -
Phac8g00726 509 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Phac8g00726 509 Gene3D Ribonuclease Inhibitor 30 103 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00726 Phac-Chr8 4689813 4693509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00726 28 92 Receptor kinase-like Gene Family AT1G27190 40.000 1.05e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Phac8g00726 PK_Tyr_Ser-Thr 3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00726 - - gmx:100801294 747.658