Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00714 ATGGCCGGCATAGACTTGGGTTCAGCATCGCATTTTGTTCATCATCGCCTTCAACGCCCTGACCTTGAAGACGATGAGAACCAACAAGACCAAGACAACAACGTTAACAATCACGAAGGGCTTGACCTAGTCACCACGAATCAAGGTCCTGGTGATATTGTCGCTCGCAGGCCAAGAGGAAGACCTCCAGGTTCAAAGAACAAGCCTAAACCACCTGTTATCATCACAAGAGAGAGTGCAAACACTCTTAGGGCTCACATCCTTGAAGTCAGCAGTGGCTGTGATGTCTTTGACTCCGTCGCTACCTACGCAAGGAAGCGACAAAGAGGGATCTGTGTCCTCAGTGGGAGTGGCACCGTCACCAATGTCACGTTGCGGCAGCCGGCCGCAGCCGGCGCCGTTGTCACGCTTCACGGAAGGTTCGAGATCCTGTCTTTGTCGGGATCATTCCTTCCACCTCCTGCTCCACCAGGTGCCACTAGTTTGACCGTTTTTCTTGGTGGAGGACAGGGCCAGGTTGTCGGAGGCAACGTTGTTGGTCCTTTGGTTGCTTCTGGGCCTGTTATTGTTATTGCTTCATCTTTTACTAATGTAGCATACGAGAGATTGCCTTTGGATGAAGAAGAATCTATGCAGATGCAACAGGGACAATCATCTGCCGGAGGTGGTGGTAACGGTGGTGGTGGTGGTGGTGGAGTCAGTAATAACTCTTTTCCCGACCCTTCTTCAGGGCTTCCATTCTTCAATTTGCCCTTAAACATGCCTCAGTTACCTGTTGATGGTTGGGGTGGGAACTCTGGTGGAAGACAATCTTACTGA 819 0.5092 MAGIDLGSASHFVHHRLQRPDLEDDENQQDQDNNVNNHEGLDLVTTNQGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGCDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLGGGQGQVVGGNVVGPLVASGPVIVIASSFTNVAYERLPLDEEESMQMQQGQSSAGGGGNGGGGGGGVSNNSFPDPSSGLPFFNLPLNMPQLPVDGWGGNSGGRQSY* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00714 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 213 - -
Phac8g00714 272 MobiDBLite consensus disorder prediction 208 250 - -
Phac8g00714 272 Gene3D - 83 218 - -
Phac8g00714 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 197 IPR005175 -
Phac8g00714 272 CDD DUF296 84 159 IPR005175 -
Phac8g00714 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 226 IPR014476 GO:0003680
Phac8g00714 272 ProSiteProfiles PPC domain profile profile. 80 217 IPR005175 -
Phac8g00714 272 FunFam AT-hook motif nuclear-localized protein 83 210 - -
Phac8g00714 272 MobiDBLite consensus disorder prediction 20 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00714 Phac-Chr8 4618770 4621247 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00714 1 269 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.784 2.85e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00714 - - vra:106758954 454.907