Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00672 ATGGAATCCATCAAGATTCTAGCCTTATGGCGGATTCTCTCCTCCTTTCTTTTGGCCTTTCTAACACACTCTTCACTCCAACTTGCTTGGTTTTCCAAAACAGTAGTTTTGGCCTCTGCTGCCAGCACAGGAACTGTTGGTGATCAAGCTGCAGCTGATAACAATGAAGCAAATGCACTGTTAAAGTGGAAACACAGCTTTGATAATAACAGCCAAGATCTCTTGTCAACTTGGACAGGTTCTACTTCATGCCAATGGCAAGGAATTCAGTGTGACAAATCCATGTTGGTCTCCAGCATAAATCTTGCAAATTATGGACTGACAGGTACACTTTCCACCCTCAACTTCTCTGCTTTTCCAAACCTCCTCATCCTAAACATCTTCAACAACTCCTTTTATGGGACCATTCCCCGACAAATTGGTAACTTGTCCAAAGTAAATGTTTTGAATCTTTCAACAAATTCTTTCCACGGTTTCATCCCTCAAGAAATGTGGACACTAAGAAGTTTACAAGGCCTTGATCTTGACCAATGTCAACTAAATGGAGAGATTCCTAATTCCATAGCAAACTTGTCCAACTTGTCCTATCTAGATTTAGGAATAAACGATTTTTCTGGCTACATTCCACCAGAGATTGGAAAGTTGTACAAGTTAGAGTATCTAAATATTAAAGATAATAAACTTTCTGGTTCCATTCCTCAAGAAATTTCAATGTTGAGAAACCTTAGGAATATTGATCTGTCATTAAATTCTCTCTCTGGTGCTCTCCCTGAAACAATAGGCAACATGAGTAATTTAAATCAACTTCGCTTTTCTAATAACTCCCTTCTATCTGGGCCAATTCCATCCTCCTTATGGACCATGTCTAACTTGACCTTGCTCTTTCTTGATAACAATAATCTTTCTGGATCAATCCCTGCTTCCATAGGAAACTTGGTCAATTTACAGACACTTGGACTTGATTACAACCACTTTTCCGGACCTATTCCTTCCACAATTGGAAACTTGACCAAGCTCACCAAGTTGTTTTTACGCTCTAACAATCTTTCTGGATCAATTCCTCCCTCTATAGGAAATTTGAACAATTTGGTAACACTTAGTCTCCAACTGAACAGTCTCTCCGGAACAATTCCTGCCACAGTCGGAAATTTGAAAAACCTCACCATTTTAGAACTGTCCTTCAACAAACTTAATGGCAGCGTTTCACAAGTCTTGAATAACATTCGAAACTTGTCTTACGTGTTACTTGCTGAGAATGATTTCACAGGCCATTTACCACCTCAAATTTGCTCTGCTGGGTCCCTAGTATCCCTTAGTGCTCATCACAACCATTTCACTGGTCCAGTGCCAATAAGCTTAAAGAACTGTCCTAGTATTACTAGACTCAGGCTGGAAGGAAACCAATTGGAAGGAGATATAGCACAGGATTTTGGTGTATATCCAAATTTGGTATACGTTGATTTGAGCGACAATAAGTTTTACGGCCAAATTTCACCAAACTGGGGGAAGTGTCCTAATCTTGGTACCTTAGCGATATCCAACATGAACATTTCTGGTGGTATACCAGTAGAACTTGTTGAGGCAACCAACCTAGGCAAGCTTCACCTTTTTTCTAACCACTTGAATGGAAATATTCCAAAGGAATTAGGGAATATGAAATCCTTAATTGAACTCAAGATTAGCAACAACCATTTTTCTGGAGACATTCCAAAAGAAATCGGATCACTGAAAATTCTGGAACAGTTGGATCTTGCAGATAACCAGTTGAGTGGAACAATACCGATAGAAGTTGTAGAATTGCCCAAGTTACGAAACTTGACTTTGAGCAATAATAAAATAAACGGAAATATTCCCTCGGAGTTTAGCAAATTTCAGCCTCTTGAATATCTTGATCTTAGTGGGAATTTGTTGAGTGGAACTATACCGAGACAGCTTGGAGAGGTGATGCTACTGCAATTTCTGAATCTCTCTCACAATAATCTTTCTGGAAATATTCCATCCAGTTTTGATGGCATTTCAAATTTGATTTCGGTCAACATATCATACAACCAGTTAGAAGGGCCACTTCCGAATAATGAAGCTTTTCTTAATGCTTCTATTGAATCATTGAAAAATAACAGAGGCTTGTGTGGCAACCTCACTGGCTTGATTCTTTGCCCAACCAACAACAGTCAGAAGAGGCACAAGGGCATTCAACTAGCATTTTTCATTGCCTTGGGTGCTCTTGTTCTAGTATTATGTGGGGTGTCAGTTTCACTGTATATTCTCCGTCGAAAAGCAAGAAAGAAAGATATACATGCTAAAGAAAATGTACATTCAGGAAAAGCAGTGTCTGGAGAAGTGTTTTCCATATGGAGTCACGATGGAAAAATTATGTTTGAAAACATCATTGAAGCTACCGATAATTTCAACGAAAAATATCTGATTGGACTTGGAGGGCAAGGATCTGTTTACAAAGCTGAGATGCCTACAGGCCAGGTTTTTGCGGTGAAGAAACTTCATCTGGAAAATGAAGAGAAGCCTAATTTTAAAGCTTTTGAAAATGAAATTCAAGCTCTGACAGAAATCAGGCACCGTAACATTGTAAAGCTGTGTGGATTTTGCTCACATTCACGGTTCTCATTTTTGGTCTACGAGTTCTTGGAAGGGGGTAGCTTGGATCAAATACTAATCCATGAAAAAAAAGCAGCTGCATTTGAGTGGGAAGTGAGGGTAAATGCTGTTAAAGGTGTGGCCTATGCTTTATCCTATATGCATCACGATTGCTCACCACCAATAATTCATCGAGACATATCCAGCAAGAATATTCTTTTAGATTCACAAAAAGAAGCTCATATCGCTGATTTTGGAACAGCTAAGATTCTAAAACCTGGTTCACGCACTTGGACCACGTTTGCAGGCACCTTTGGGTATGCAGCTCCAGAGCTTGCCCTGACTATGGAAGTGAGTGAGAAATGTGATGTATTCAGTTTTGGAGTGCTTTGTCTAGAAATCATCATGGGGAAGCATCCAGGGGATCTGGTATCTTCGTTGTTATCTTCATCTTCAGCAGCAATAACTCATAGCTTGCTACTAATTGATGTAATAGACCAAAGACCTCCTCATCCTCCTAAATGGGTTGTTGGGGAAGTCATTTTGGTTGCAAGCTTGGCATTTTCTTGCTTGAGTGAAAATCCATGTTCTCGTCCAACCATGGATCAAGTGTCCAAAAAGCTTATGATGGGTAAATCACCTTTAGCAGATGAGTTCCCCAAGATCAGACTTGCACAACTCCTCTAA 3279 0.3968 MESIKILALWRILSSFLLAFLTHSSLQLAWFSKTVVLASAASTGTVGDQAAADNNEANALLKWKHSFDNNSQDLLSTWTGSTSCQWQGIQCDKSMLVSSINLANYGLTGTLSTLNFSAFPNLLILNIFNNSFYGTIPRQIGNLSKVNVLNLSTNSFHGFIPQEMWTLRSLQGLDLDQCQLNGEIPNSIANLSNLSYLDLGINDFSGYIPPEIGKLYKLEYLNIKDNKLSGSIPQEISMLRNLRNIDLSLNSLSGALPETIGNMSNLNQLRFSNNSLLSGPIPSSLWTMSNLTLLFLDNNNLSGSIPASIGNLVNLQTLGLDYNHFSGPIPSTIGNLTKLTKLFLRSNNLSGSIPPSIGNLNNLVTLSLQLNSLSGTIPATVGNLKNLTILELSFNKLNGSVSQVLNNIRNLSYVLLAENDFTGHLPPQICSAGSLVSLSAHHNHFTGPVPISLKNCPSITRLRLEGNQLEGDIAQDFGVYPNLVYVDLSDNKFYGQISPNWGKCPNLGTLAISNMNISGGIPVELVEATNLGKLHLFSNHLNGNIPKELGNMKSLIELKISNNHFSGDIPKEIGSLKILEQLDLADNQLSGTIPIEVVELPKLRNLTLSNNKINGNIPSEFSKFQPLEYLDLSGNLLSGTIPRQLGEVMLLQFLNLSHNNLSGNIPSSFDGISNLISVNISYNQLEGPLPNNEAFLNASIESLKNNRGLCGNLTGLILCPTNNSQKRHKGIQLAFFIALGALVLVLCGVSVSLYILRRKARKKDIHAKENVHSGKAVSGEVFSIWSHDGKIMFENIIEATDNFNEKYLIGLGGQGSVYKAEMPTGQVFAVKKLHLENEEKPNFKAFENEIQALTEIRHRNIVKLCGFCSHSRFSFLVYEFLEGGSLDQILIHEKKAAAFEWEVRVNAVKGVAYALSYMHHDCSPPIIHRDISSKNILLDSQKEAHIADFGTAKILKPGSRTWTTFAGTFGYAAPELALTMEVSEKCDVFSFGVLCLEIIMGKHPGDLVSSLLSSSSAAITHSLLLIDVIDQRPPHPPKWVVGEVILVASLAFSCLSENPCSRPTMDQVSKKLMMGKSPLADEFPKIRLAQLL* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00672 1092 SUPERFAMILY RNI-like 296 686 - -
Phac8g00672 1092 FunFam MDIS1-interacting receptor like kinase 2 isoform A 53 208 - -
Phac8g00672 1092 SUPERFAMILY L domain-like 53 323 - -
Phac8g00672 1092 PANTHER LEUCINE RICH REPEAT KINASE 2 357 1076 - -
Phac8g00672 1092 Pfam Leucine rich repeat 601 661 IPR001611 GO:0005515
Phac8g00672 1092 Pfam Leucine rich repeat N-terminal domain 54 92 IPR013210 -
Phac8g00672 1092 SUPERFAMILY Protein kinase-like (PK-like) 789 1072 IPR011009 -
Phac8g00672 1092 Gene3D Transferase(Phosphotransferase) domain 1 881 1081 - -
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 596 716 IPR032675 -
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 207 306 IPR032675 -
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 52 206 IPR032675 -
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 307 403 IPR032675 -
Phac8g00672 1092 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 279 379 - -
Phac8g00672 1092 ProSiteProfiles Protein kinase domain profile. 803 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 496 595 IPR032675 -
Phac8g00672 1092 Gene3D Ribonuclease Inhibitor 404 495 IPR032675 -
Phac8g00672 1092 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 408 723 - -
Phac8g00672 1092 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 880 - -
Phac8g00672 1092 SMART LRR_sd22_2 600 629 - -
Phac8g00672 1092 SMART LRR_sd22_2 239 265 - -
Phac8g00672 1092 SMART LRR_sd22_2 336 362 - -
Phac8g00672 1092 SMART LRR_sd22_2 384 410 - -
Phac8g00672 1092 SMART LRR_sd22_2 576 597 - -
Phac8g00672 1092 SMART LRR_sd22_2 288 314 - -
Phac8g00672 1092 SMART LRR_typ_2 288 312 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 191 215 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 600 623 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 239 262 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 384 407 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 624 648 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 336 360 IPR003591 -
Phac8g00672 1092 SMART LRR_typ_2 552 576 IPR003591 -
Phac8g00672 1092 Gene3D Phosphorylase Kinase; domain 1 763 880 - -
Phac8g00672 1092 Pfam Protein kinase domain 804 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00672 1092 ProSitePatterns Tyrosine protein kinases specific active-site signature. 926 938 IPR008266 GO:0004672|GO:0006468
Phac8g00672 1092 FunFam MDIS1-interacting receptor like kinase 2 881 1078 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00672 Phac-Chr8 4418899 4422751 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00672 50 974 Receptor kinase-like Gene Family AT4G08850 43.710 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g00672 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00672 - - vra:106759489 1844.71