Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00659 ATGAAAGCTCCGCAGCAAGTTGTTGTAACAAACAACAACAACTCTATCTCCAAATCTGAGATGGATACTTCAGAATTTGATATGACATTTTCGGACACTATAGAACATTACATGCTTGACGATGAAGCATGTGGTTTGAAGAACAATGTTTTGGTCTCAAATGAGAATTGTTTGTCTGAGAAAGGTGGTGGTAAAGTGGAAGAGGAAGTTCCGAGAGGGACGAGGTACAAAGGAGTGAGGCGTAGGGCACATGGAAAGTTTGCTGCAGAGATAAAAGATCCAAACAGAAGTAATAGGATTTGGCTTGGGACTTACGACACTGAAGAAGAAGCTGCTTTGGCTTATGACAATGCAGTTTTCAAGATCAGAGGGTCCAAATCCAAGCTTAATTTTCCTCACCTCATTCCACCGTTGGATGCATCAAGCATCCACGTGGCTGACCCTCCTTCTTCATCATCCACACCTGAGGATCGTTCTGAAGGGTCCAGGAAAAGGAAGGGAGTAGCTGGTTTGCTCAATAAATTAGCACATGAAAAAAACAGAATTTGA 549 0.4244 MKAPQQVVVTNNNNSISKSEMDTSEFDMTFSDTIEHYMLDDEACGLKNNVLVSNENCLSEKGGGKVEEEVPRGTRYKGVRRRAHGKFAAEIKDPNRSNRIWLGTYDTEEEAALAYDNAVFKIRGSKSKLNFPHLIPPLDASSIHVADPPSSSSTPEDRSEGSRKRKGVAGLLNKLAHEKNRI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00659 182 SUPERFAMILY DNA-binding domain 75 133 IPR016177 GO:0003677
Phac8g00659 182 SMART rav1_2 75 138 IPR001471 GO:0003700|GO:0006355
Phac8g00659 182 MobiDBLite consensus disorder prediction 140 182 - -
Phac8g00659 182 ProSiteProfiles AP2/ERF domain profile. 75 132 IPR001471 GO:0003700|GO:0006355
Phac8g00659 182 PANTHER DNA-BINDING DOMAIN 55 158 IPR044808 GO:0003700|GO:0009873
Phac8g00659 182 Gene3D AP2/ERF domain 74 133 IPR036955 GO:0003700|GO:0006355
Phac8g00659 182 PRINTS Ethylene responsive element binding protein signature 98 114 IPR001471 GO:0003700|GO:0006355
Phac8g00659 182 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Phac8g00659 182 CDD AP2 74 134 IPR001471 GO:0003700|GO:0006355
Phac8g00659 182 FunFam Ethylene-responsive transcription factor 2 74 133 - -
Phac8g00659 182 Pfam AP2 domain 74 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00659 Phac-Chr8 4231705 4232253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00659 72 135 AP2-EREBP Transcription Factor Family AT2G44840 66.154 6.54e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g00659 AP2 5.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00659 K09286 - pvu:PHAVU_008G046500g 322.783