Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00658 ATGAGTTCAACCACCACGGATTCCGACTTTGCGTTCTTGGAATCTGTTCGACAATACCTACTTGGACACGATTCCATCAACCTCATGCCTGCAACAACCCACCAAGTTGCTTCTCATGATCCACTTTCAAACTCTAAATGCAATGGTGATCTCGAGAACGTTATTTTCCGCAGTGAGGATGCAACTGCTGCGGTGGCGCGTCATGTCCACGCACCACAGACATGGAAGCATTACCGAGGCGTTAGGCGTAGGCCGTGGGGGAAGTTTGCGGCGGAGATAAGGGATCCAAAGAAGAACGGAGCTAGGGTTTGGCTTGGAACTTTTGACACTGAAAAGAAAGCAGCTTTGGCTTACGACAAAGCAGCTTTCAAGATGCGTGGTCAAAAAGCTAAGTTGAATTTTCCTCATCTTATAGATTCTGATAACTGCGGTACAGTGTCAGAACCGGTGATGGAAACAGCTTCTAAGAGGGAGTTGTCACAAAGTTTTCAACCATCTTCACCATCATCGTTGTGCTCAGATGATAGCTCAGAGTCACAAGGGACAAAGAGGAGGAAGAAGAACCTCACTGATCTATTGAATAAGTTAGCCAAGAACAGAAGCCAAGCCAAGGTTGCATATTGA 624 0.4647 MSSTTTDSDFAFLESVRQYLLGHDSINLMPATTHQVASHDPLSNSKCNGDLENVIFRSEDATAAVARHVHAPQTWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTFDTEKKAALAYDKAAFKMRGQKAKLNFPHLIDSDNCGTVSEPVMETASKRELSQSFQPSSPSSLCSDDSSESQGTKRRKKNLTDLLNKLAKNRSQAKVAY* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00658 207 PANTHER DNA-BINDING DOMAIN 63 183 IPR044808 GO:0003700|GO:0009873
Phac8g00658 207 Coils Coil 186 206 - -
Phac8g00658 207 Gene3D AP2/ERF domain 76 136 IPR036955 GO:0003700|GO:0006355
Phac8g00658 207 ProSiteProfiles AP2/ERF domain profile. 77 135 IPR001471 GO:0003700|GO:0006355
Phac8g00658 207 FunFam Ethylene-responsive transcription factor 2 76 136 - -
Phac8g00658 207 MobiDBLite consensus disorder prediction 154 188 - -
Phac8g00658 207 MobiDBLite consensus disorder prediction 154 177 - -
Phac8g00658 207 Pfam AP2 domain 77 127 IPR001471 GO:0003700|GO:0006355
Phac8g00658 207 SUPERFAMILY DNA-binding domain 77 136 IPR016177 GO:0003677
Phac8g00658 207 CDD AP2 76 137 IPR001471 GO:0003700|GO:0006355
Phac8g00658 207 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Phac8g00658 207 PRINTS Ethylene responsive element binding protein signature 117 137 IPR001471 GO:0003700|GO:0006355
Phac8g00658 207 SMART rav1_2 77 141 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00658 Phac-Chr8 4225731 4226784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00658 63 179 AP2-EREBP Transcription Factor Family AT2G44840 59.322 2.74e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g00658 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00658 K09286 - gmx:548037 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g00558 10 6977394 6978161 Phac8g00658 8 4225731 4226784 PCT