Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00641 ATGTCCTTTCTTCTTATTTATGTTTTGCTTTTTCTGAGCTCTGTTTGGGAGTTAGGATCAGCGTCTACACCATCACAGCTTCAATTGGAAGCAAACGCTATAATCAACAGTGGATGGTGGAATCTGTCGTCATCAGATTCACACCGTATCTGTTCATTGATTCATGGCATACATTGCAATGATGCTGGAAGTGTAATTCGTATCACATATCTGTGTTCCGAAAAAGCGGTTCAATTATCAACACTAAACCTCTCTGCTTTCAAGAATTTAGAATCCTTTCAGGTCTCCTACTGTCTAGAAGGGACTATCCCACCTGAAATTGGTAGTCTTTCCAAACTCACTGTTATTCATTTATCCTCCAATGCTCTTAAAGGTGGAATACCTTTCACAATAGGAAATCTTTCTAAACTTACTGGTCTTGATTTATCCCATAATTTTCTTCAAGGTGAAATACCTTTCTCCATAGAAAATCTTTCCAAACTTACTCATCTTGATTTATCCCATAATTCTCTTCAAGGTAAAATACATTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCCTATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACCAGTCTTGATTTATCCCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACCGGTCTTGATTTATCCCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCGAACTCACTTATCTTGATTTATCTCACAATTTTCTTCAAGGTGAAATACCTTTCATAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATTCGATAATTCTCTTCAAGGTGAAATACCTTTCACATTAGGAAATCTTTCCAAACTCACCGGTCTTGATTTATCCTATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCCTATAATTTTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACCAGTCTTGGTTTATCTCATAATTCTCTTCAAGGTGTAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTGTCCTATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGAAAATCTTTCCAAACTCACCGGTCTTGATTTATCCAATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGCAAATCTTTTCAAACTCACTGGTCTTTATTTATCCTATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACCAGTCTTGATTTATCCCATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTGGTCTTGATTTATCCTATAATTCTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCGAACTCACTTATCTTGATTTATCCCACAATTTTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCGAACTCACTTATCTTGATTTATCCCACAATTTTCTTCAAGGTGAAATACCTTTCACAATAGGAAATCTTTCCGAACTCACTTATCTTGATTTATCCCACAATTTTCTTCAAGGTGAAATACCTACCATAATAATGAATCTAACCCAACTATGGGGCCTAGTAATCTCTAACAACTACATTGAAGGCTCCATTCCTTTTGAATTGTCATTCTTGGTAAATCTTGTTCATGTAAATCTATCTTCCAATAAAATCAATGGAACCTTGTCCTTTTCACTTTCAAACTTAATGAACCTTCAAATTCTAGACATTTCACATAATCTACTCACTGGTTCCCTAAAACCCTTCTCAGATAGAGATTTTTCAATCTTAGAAAGTCTAGACCTAGGCTACAATAATCTTACTGGTCCACCTCTATTTTTGAATGCCTATAATGTGGACCTTTCCTTCAATAATTTGAAAGGTCCCATACCAAACGGTTTAAATCCAGATGTGTTTAAAGGAAACAAGGGTGTATGCAGCGACATTTTAAATATACAAACCAAATACCAATTCCAACCTTGTTCAGTCCTCCACAAGAAACTAACCCAGAATCATCTGGTCATAATTCTTTCTATCACAATTTTTTTAATCACGGCTTTCTCACTACTTTTATATTTGAGGCTCAATCGTGTTGCAATCAAGGACAAACATGCAAGGTTAACAGAAATATCTAAGAATGGGGACTTGTTCTGCTTATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTACAGCAACTGAAGACTTTGACCTCAAATATTGTATCGGAACAGGTGCCTACGGGAGTGTTTATAGGGCTCAACTACCAAGTGGCAAGATTGTTGCGGTGAAAAAACTCCATGGCTTTGAAGCAGAGGTCCCCACATTTGATGAGAGTTTCAGAAACGAAGCCAAAGTATTGTCAGAAATAAAGCACCGACATATCGTTAAGCTCCACGGATTTTGCTTGCACAAAAGAATCATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTTTGATGACATAGAAGCAATGGAATTGGATTGGAAAAAGAGGGTTAACACAGTGAAAGGCACTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACATATCAGCAAGCAACGTGTTGCTTAACTCCAACTGGGAGCCTACTGTTTCTGACTTTGGCACAGCTCGATTTCTCAATCTTGATTCATCCAATTAA 2829 0.3602 MSFLLIYVLLFLSSVWELGSASTPSQLQLEANAIINSGWWNLSSSDSHRICSLIHGIHCNDAGSVIRITYLCSEKAVQLSTLNLSAFKNLESFQVSYCLEGTIPPEIGSLSKLTVIHLSSNALKGGIPFTIGNLSKLTGLDLSHNFLQGEIPFSIENLSKLTHLDLSHNSLQGKIHFTIGNLSKLTGLDLSYNSLQGEIPFTIGNLSKLTSLDLSHNSLQGEIPFTIGNLSKLTGLDLSHNSLQGEIPFTIGNLSELTYLDLSHNFLQGEIPFIIGNLSKLTGLDLFDNSLQGEIPFTLGNLSKLTGLDLSYNSLQGEIPFTIGNLSKLTGLDLSYNFLQGEIPFTIGNLSKLTSLGLSHNSLQGVIPFTIGNLSKLTGLDLSYNSLQGEIPFTIENLSKLTGLDLSNNSLQGEIPFTIANLFKLTGLYLSYNSLQGEIPFTIGNLSKLTSLDLSHNSLQGEIPFTIGNLSKLTGLDLSYNSLQGEIPFTIGNLSELTYLDLSHNFLQGEIPFTIGNLSELTYLDLSHNFLQGEIPFTIGNLSELTYLDLSHNFLQGEIPTIIMNLTQLWGLVISNNYIEGSIPFELSFLVNLVHVNLSSNKINGTLSFSLSNLMNLQILDISHNLLTGSLKPFSDRDFSILESLDLGYNNLTGPPLFLNAYNVDLSFNNLKGPIPNGLNPDVFKGNKGVCSDILNIQTKYQFQPCSVLHKKLTQNHLVIILSITIFLITAFSLLLYLRLNRVAIKDKHARLTEISKNGDLFCLWNYDGSIAYEDIITATEDFDLKYCIGTGAYGSVYRAQLPSGKIVAVKKLHGFEAEVPTFDESFRNEAKVLSEIKHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLFDDIEAMELDWKKRVNTVKGTAHALSYLHHDCVPPIVHRDISASNVLLNSNWEPTVSDFGTARFLNLDSSN* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00641 942 SMART LRR_sd22_2 494 520 - -
Phac8g00641 942 SMART LRR_sd22_2 254 280 - -
Phac8g00641 942 SMART LRR_sd22_2 374 400 - -
Phac8g00641 942 SMART LRR_sd22_2 446 472 - -
Phac8g00641 942 SMART LRR_sd22_2 614 647 - -
Phac8g00641 942 SMART LRR_sd22_2 206 232 - -
Phac8g00641 942 SMART LRR_sd22_2 542 568 - -
Phac8g00641 942 SMART LRR_sd22_2 302 328 - -
Phac8g00641 942 SMART LRR_sd22_2 134 160 - -
Phac8g00641 942 FunFam Os07g0541700 protein 862 942 - -
Phac8g00641 942 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 367 462 - -
Phac8g00641 942 Gene3D Ribonuclease Inhibitor 175 272 IPR032675 -
Phac8g00641 942 Gene3D Ribonuclease Inhibitor 25 174 IPR032675 -
Phac8g00641 942 Gene3D Ribonuclease Inhibitor 425 701 IPR032675 -
Phac8g00641 942 Gene3D Ribonuclease Inhibitor 353 423 IPR032675 -
Phac8g00641 942 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 177 271 - -
Phac8g00641 942 FunFam Nuclear pore complex protein NUP107 25 176 - -
Phac8g00641 942 ProSitePatterns Tyrosine protein kinases specific active-site signature. 907 919 IPR008266 GO:0004672|GO:0006468
Phac8g00641 942 Gene3D Transferase(Phosphotransferase) domain 1 862 942 - -
Phac8g00641 942 SUPERFAMILY Protein kinase-like (PK-like) 767 940 IPR011009 -
Phac8g00641 942 PRINTS Leucine-rich repeat signature 209 222 - -
Phac8g00641 942 PRINTS Leucine-rich repeat signature 446 459 - -
Phac8g00641 942 SMART LRR_typ_2 302 326 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 206 230 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 542 566 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 350 373 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 110 134 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 494 518 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 158 182 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 446 470 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 374 397 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 590 613 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 254 278 IPR003591 -
Phac8g00641 942 SMART LRR_typ_2 398 425 IPR003591 -
Phac8g00641 942 Pfam Leucine rich repeat 448 505 IPR001611 GO:0005515
Phac8g00641 942 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Phac8g00641 942 Pfam Leucine rich repeat 208 265 IPR001611 GO:0005515
Phac8g00641 942 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Phac8g00641 942 Pfam Leucine rich repeat 352 411 IPR001611 GO:0005515
Phac8g00641 942 Gene3D Phosphorylase Kinase; domain 1 745 861 - -
Phac8g00641 942 SUPERFAMILY L domain-like 63 223 - -
Phac8g00641 942 Pfam Protein kinase domain 788 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00641 942 SUPERFAMILY L domain-like 179 484 - -
Phac8g00641 942 ProSitePatterns Protein kinases ATP-binding region signature. 789 812 IPR017441 GO:0005524
Phac8g00641 942 FunFam MDIS1-interacting receptor like kinase 2 isoform A 272 366 - -
Phac8g00641 942 PANTHER OS01G0750400 PROTEIN 82 273 - -
Phac8g00641 942 ProSiteProfiles Protein kinase domain profile. 783 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00641 942 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 463 702 - -
Phac8g00641 942 SUPERFAMILY RNI-like 391 681 - -
Phac8g00641 942 FunFam Leucine-rich repeat protein kinase family protein 747 861 - -
Phac8g00641 942 Gene3D Ribonuclease Inhibitor 273 352 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00641 Phac-Chr8 4139230 4142167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00641 37 942 Receptor kinase-like Gene Family AT4G08850 39.434 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g00641 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00641 - - mtr:25501173 959.518