Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00631 ATGATGCAGTTTTTGGATTCCAATTTCCATGGTATGTTCTTTCTTCTTATTTATGTTTTGCTTTTTCTGAGCTCTGTTTTGGAGCTAGGATCAGCGTCTACACCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTGGATGGTGGAATCACTCCTCCTCAGATTCACATCATATTTGTTCGTTGAATCATGGTATACATTGCAATGCTGCTGGAAGTAATTTAGAATCCTTTGAGGTCGCCTATTGTAGTCTACATGGCACTATCCCACCTGAAATAGGAAATCTTCCCAAACTTACTCATCTTGATTTTTGTTATAATTCTCTTAGTGGTAAAATACCTTCCACGATAGGAAATCTTTTGGAACTCACTTATCTTCATTTTTCTCACAATTCACTTCATGGGGAGATACCTTCTACAATTGGAAATCTTTCCAAACTCAATGATCTTGATTTATCCTACAACTCTCTTCAAGGTGAAATACCTCCCACAATAGGAAATCTTTCAAAACTTACTATTCTTGATTTATCCTACAATTCTCTTGAAGGTGAAATACCTCCTACAATTGGAAATCTTTCCAAACTTTTTCATCTTGATTTATCCCACAATTCTTTTCATGGGGAGATACCTCCTACAATAGGAAATCTTTCCAATCTCACTCATCTTCATTTATCCTCCAATACTCTTCAAGGAGAAATACCTCCCACAATTGGAAATCTAACCCAACTATGGAGCCTGGTAATCTCTAACAACTACATTGAAGGTCCCATTTTTTTTGAATTGTCATTCCTGCAAAATCTTAATGTTGCAAATCTATCTTACAACAAAATCAATGGAACATTGCCCGTTTCACTTTCAAACCTTAGGAACCTTAAAAAATTTGACATTTCACACAATCTACTTACTGGTTCCTTAATACCCTTCTTAGTACAAGATTTTCCATCCTTAGAAAGTTTGGACCTAAGCTACAATAATCTTACCGGTCTACCTCTACTTTTGAATGCCTATAATGTGGACCTTTCCTTCAATAATTTGAAGGGTCCCATTCCAGATGGTTTAAATCCATATGTGCTAAAAGGGAACAAAGGCGTATGCAGCGACATTTTTCATGTACAAACGGAATACCAATTCCAACCTTGTTTAGTCCGCCACAGGAAACTAACCAAGAATCAGAATCGGTTGGTCATAATTCTTTCTGTCACCATTTTTCTAATCATGATCTTCTCTAAACTTCTATATCTGAGACACAATCGCACTGTAGTCAAGAACAAAGATGCAAGGTTAACAAAAATATCTAAGAATGGGGACTTGTTCTGCATATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTACAGCAACTGAAGACTTTGACCTCAAATATTGTATCGGAACAGGTGCATACGGGTGTGTTTATAGGGCTCAACTACCAAGTGGCAAGATTGTTGCGGTGAAAAAACTCCACGGCTTTGATGCAGCGGTCTCCACATTTGATGAGAGTTTCAGAAACGAAGCCAGAGTATTGTCAGAAATAAAGCACCGACATATCGTCAAGCTCCATGGATTTTGTTTGCACAAAAGAATCATGTTTTTGATCTATGAGTACATGGAGAAAGGAAGCTTGTTTTCTGTCTTGTATGATAACATGGAAGCAATGGAATTCGATTGGAAAAAGAGGGTTAACACAGTGAAAGGCATTGCACATGCTCTCTCATATCTTCATCATGATTGTGTCCCTCCAATAGTGCATAGAGACATATCAGCATGCAATGTGTTACTTAACTCCAACTGGGAGCCTACTGTTTCTGACTTTGGCATAGCTCGATTTCTGAACCTTGATTCATCCAATCGAACTATAGTTGCTGGAACCATTGGATACATAGCTCCAGAGCTTGCGTATACAATGGTTGTGAATGAAAAGTGTGATGTGTATAGCTTCGGAGTGGTGGCGCTAGAAATTTTGATGGGAAAACATCCTAAGGATATACTCTCATCACTTCAATCAACTTCTACGATATGTGAAATATTGGACCAACGTCTCCCACACCCAACAGTTTCAGTTTTACAAGACATAGTTGTTGTTGCCATTGTGGCCTTTGCGTGCTTAAATCCAAATCCTTGCTCCCGTCCAACAATGAAAAGCATCTCTCAATGTTTTCTTACTCGGCTCACACCATTCAACATTCCTTTACATCATATTTCATTGCAGCAGCTCATGAGTCGAGAACTCACCCACTACTTAAAATTGTGA 2262 0.3833 MMQFLDSNFHGMFFLLIYVLLFLSSVLELGSASTPSQLQLEANAIINSGWWNHSSSDSHHICSLNHGIHCNAAGSNLESFEVAYCSLHGTIPPEIGNLPKLTHLDFCYNSLSGKIPSTIGNLLELTYLHFSHNSLHGEIPSTIGNLSKLNDLDLSYNSLQGEIPPTIGNLSKLTILDLSYNSLEGEIPPTIGNLSKLFHLDLSHNSFHGEIPPTIGNLSNLTHLHLSSNTLQGEIPPTIGNLTQLWSLVISNNYIEGPIFFELSFLQNLNVANLSYNKINGTLPVSLSNLRNLKKFDISHNLLTGSLIPFLVQDFPSLESLDLSYNNLTGLPLLLNAYNVDLSFNNLKGPIPDGLNPYVLKGNKGVCSDIFHVQTEYQFQPCLVRHRKLTKNQNRLVIILSVTIFLIMIFSKLLYLRHNRTVVKNKDARLTKISKNGDLFCIWNYDGSIAYEDIITATEDFDLKYCIGTGAYGCVYRAQLPSGKIVAVKKLHGFDAAVSTFDESFRNEARVLSEIKHRHIVKLHGFCLHKRIMFLIYEYMEKGSLFSVLYDNMEAMEFDWKKRVNTVKGIAHALSYLHHDCVPPIVHRDISACNVLLNSNWEPTVSDFGIARFLNLDSSNRTIVAGTIGYIAPELAYTMVVNEKCDVYSFGVVALEILMGKHPKDILSSLQSTSTICEILDQRLPHPTVSVLQDIVVVAIVAFACLNPNPCSRPTMKSISQCFLTRLTPFNIPLHHISLQQLMSRELTHYLKL* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00631 753 SMART LRR_sd22_2 218 244 - -
Phac8g00631 753 SMART LRR_sd22_2 170 196 - -
Phac8g00631 753 SMART LRR_sd22_2 122 148 - -
Phac8g00631 753 SMART LRR_sd22_2 290 323 - -
Phac8g00631 753 ProSitePatterns Tyrosine protein kinases specific active-site signature. 585 597 IPR008266 GO:0004672|GO:0006468
Phac8g00631 753 ProSiteProfiles Leucine-rich repeat profile. 317 338 IPR001611 GO:0005515
Phac8g00631 753 Pfam Leucine Rich repeat 316 330 IPR001611 GO:0005515
Phac8g00631 753 ProSitePatterns Protein kinases ATP-binding region signature. 467 490 IPR017441 GO:0005524
Phac8g00631 753 FunFam MDIS1-interacting receptor like kinase 2 540 729 - -
Phac8g00631 753 SUPERFAMILY Protein kinase-like (PK-like) 444 722 IPR011009 -
Phac8g00631 753 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 424 539 - -
Phac8g00631 753 PANTHER LEUCINE RICH REPEAT KINASE 2 36 725 - -
Phac8g00631 753 SUPERFAMILY L domain-like 62 352 - -
Phac8g00631 753 Pfam Leucine Rich Repeat 220 242 IPR001611 GO:0005515
Phac8g00631 753 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Phac8g00631 753 SMART LRR_typ_2 98 122 IPR003591 -
Phac8g00631 753 SMART LRR_typ_2 146 169 IPR003591 -
Phac8g00631 753 SMART LRR_typ_2 315 338 IPR003591 -
Phac8g00631 753 SMART LRR_typ_2 218 242 IPR003591 -
Phac8g00631 753 SMART LRR_typ_2 170 194 IPR003591 -
Phac8g00631 753 ProSiteProfiles Protein kinase domain profile. 461 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00631 753 Gene3D Ribonuclease Inhibitor 36 185 IPR032675 -
Phac8g00631 753 Pfam Protein tyrosine and serine/threonine kinase 464 722 IPR001245 GO:0004672|GO:0006468
Phac8g00631 753 Gene3D Phosphorylase Kinase; domain 1 422 539 - -
Phac8g00631 753 Gene3D Ribonuclease Inhibitor 284 358 IPR032675 -
Phac8g00631 753 Gene3D Transferase(Phosphotransferase) domain 1 540 728 - -
Phac8g00631 753 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 71 336 - -
Phac8g00631 753 PRINTS Leucine-rich repeat signature 170 183 - -
Phac8g00631 753 PRINTS Leucine-rich repeat signature 149 162 - -
Phac8g00631 753 Gene3D Ribonuclease Inhibitor 186 283 IPR032675 -
Phac8g00631 753 Pfam Leucine rich repeat 148 206 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00631 Phac-Chr8 4034087 4036748 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00631 74 633 Receptor kinase-like Gene Family AT4G08850 39.373 5.16e-124 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g00631 PK_Tyr_Ser-Thr 2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00631 - - vum:124822324 931.784