Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00628 ATGATGCAGTTTTTTAATTCCAATTTCCATGGTATGTCCTTTCTTCTTATTTATGTTTTGCTTTTTCTGAGCTCTGTTTTGGAGTTAGGATCAGCGTCTACACCATCGCAGCTTCAATTGGAAGCAAACGCTATAATCAATAGTAGATGGACGGATTCAATTAGCAACACTAAACCTCTCTCTGCTTTCAAGAATTTAGAATTCTTCGAGGTCGCCTACTGTCTAGGAGGGACTATCCCACCTGAAATTGGTACTCTTTCCAAACTTACTTATCTTGAATTATCCTTCAATGCTCTCCAAGGTGTAATACCTTTTACAATAGGAAATCTTTCCAAACTCACTCGTCTTGATTTATCCCACAATTCTCTTAATGATGAAATACCTTTCACAATAGGAAATCTTTCCAAACTCACTCATCTTAGTTTATACCACAATTTTCTTCAAGGTAAAATACCTGCCACAATAGGAAATCTTTCCAAGCTCATTCAGCTTGATTTATCCTACAATTCTCTTAAAAGTAAAATACCTTCCACAATAGGAAACCTTTCTAAACTCACTTTTCTTGATTTATCATACAATTCTCTTCAAGGTGAAATACCTACCACAATAAAAAATCTAACTCAACTATGGAGCCTAGTAATCTCTAACAACTACATAGAAGGCTCCATTCCTTTTGAATTGTCATTCTCGCGAAATCTTAGTGATGTAGATCTATCTTACAATAAAATCAATGGAACCTTGTCCTTTTCACTTTCAAACATCACGAACCTTCAAAATCTAGATGTTTCACATAATCTACTCACTGGTTCCCTGAAACCTTTCTTAGGAAGAGATTTTTCATTCTTAAGTTTGGATCTAAGCTACAATAATCTTACCGGTCTGCCTCTAGTTTTGAATTATTATTATGTGGACATTTCCTTCAATAATTTAAAGGGTCCCATTCCAGACGGTTTAAATCCATATGTGTTGAAAGGAAACAAGGGTGTATGCAGTGACAATTTAACTATACAAACCAAATATCAATTCCAACCTTGTTCAGTCCGCCACAAGAAACTAACACTAAATTGGAATCAGAATCAGAATCAGCTGGTCATAATTCTATTGATCACCATTTTTTTAACCATGGCCTTCATACTATATTTATATATGAGGCTCTATCGTGTTGCAATCAAGAAAAAACATGCAAGGTTAACAGAAACGTCTAAGAATGGAGACTTGTTCTGCATATGGAACTATGACGGAAGCATAGCCTATGAAGACATCATTACAGCAACTGAAGACTTTGACATCAAATATTGTATCGGAACAGGTGCGTATGGGAGTGTTTATAGGGCTGAACTACCAAGTGGTAAGATTGTTGCAGTGAAAAAACTCCATGGCTTTGAAGCAGATGTCCCCACATTTGATGGGAGTTTCAAAAACGAAGTCAAAGTATTGTCAGAAATAAAGCACCGACATATCGTCAAGCTCCACGGATTCTACTTGCACAAAAGAATTGTGTTTTTGATCTATGAGTACATGGAAAAAGGAAGCCTGTTTTCTATCTTGTTTGATGACATGGGAGCAATGGAATTGGATTGGATAAAGAGGGTTAACACGGTGAAAGGCACTGCACATGCTCTCTCATATCTTCATCATGATTGCGTCCCTCCAATAGTGCATAGAGACGTATCGGCAAGCAATGTTTTGCTTAACTCCAATTGGGAACCTACTGTTTCTGACTTTGGCACAGCTCGATTTTTGAATCTTGATTCATCCAATCGAACTATAGTTGTTGGAACCATTGGATACATAGCTCCAGAGCTTGCATATACAACAGTTGTAAATGAAAAGTGTGATGTGTATAGCTTCGGAGTGGTGGCGCTAGAAACTTTGATGGGAAAACATCCTAAGGATATATTCTCATCACTTCAATCAACTTCTACCGTATGTGAAATATTGGACCAACGTCTTCCACACCCAACAGTTTCAGTTTTACAAGACATAGTTGTTGTTTCCATTGTGGCCTTTGCGTGCTTAAATCCAAATCCTTGCTCTCGTCCAACAATGAAATGCATCTCTCAATGTTTTCTTACTCGGCTCACACCATTCAACATTCCTTTACATTATATTTCATTGCAGCAGCTCATGAGTGGAGAACTCACTCACTACTTAAAATTGTGA 2163 0.3722 MMQFFNSNFHGMSFLLIYVLLFLSSVLELGSASTPSQLQLEANAIINSRWTDSISNTKPLSAFKNLEFFEVAYCLGGTIPPEIGTLSKLTYLELSFNALQGVIPFTIGNLSKLTRLDLSHNSLNDEIPFTIGNLSKLTHLSLYHNFLQGKIPATIGNLSKLIQLDLSYNSLKSKIPSTIGNLSKLTFLDLSYNSLQGEIPTTIKNLTQLWSLVISNNYIEGSIPFELSFSRNLSDVDLSYNKINGTLSFSLSNITNLQNLDVSHNLLTGSLKPFLGRDFSFLSLDLSYNNLTGLPLVLNYYYVDISFNNLKGPIPDGLNPYVLKGNKGVCSDNLTIQTKYQFQPCSVRHKKLTLNWNQNQNQLVIILLITIFLTMAFILYLYMRLYRVAIKKKHARLTETSKNGDLFCIWNYDGSIAYEDIITATEDFDIKYCIGTGAYGSVYRAELPSGKIVAVKKLHGFEADVPTFDGSFKNEVKVLSEIKHRHIVKLHGFYLHKRIVFLIYEYMEKGSLFSILFDDMGAMELDWIKRVNTVKGTAHALSYLHHDCVPPIVHRDVSASNVLLNSNWEPTVSDFGTARFLNLDSSNRTIVVGTIGYIAPELAYTTVVNEKCDVYSFGVVALETLMGKHPKDIFSSLQSTSTVCEILDQRLPHPTVSVLQDIVVVSIVAFACLNPNPCSRPTMKCISQCFLTRLTPFNIPLHYISLQQLMSGELTHYLKL* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00628 720 SUPERFAMILY L domain-like 60 313 - -
Phac8g00628 720 PRINTS Leucine-rich repeat signature 113 126 - -
Phac8g00628 720 PRINTS Leucine-rich repeat signature 182 195 - -
Phac8g00628 720 PANTHER LEUCINE RICH REPEAT KINASE 2 232 692 - -
Phac8g00628 720 FunFam Nuclear pore complex protein NUP107 138 225 - -
Phac8g00628 720 FunFam Leucine-rich repeat receptor protein kinase EMS1 57 137 - -
Phac8g00628 720 Gene3D Transferase(Phosphotransferase) domain 1 507 695 - -
Phac8g00628 720 ProSitePatterns Protein kinases ATP-binding region signature. 434 457 IPR017441 GO:0005524
Phac8g00628 720 ProSiteProfiles Protein kinase domain profile. 428 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00628 720 SUPERFAMILY Protein kinase-like (PK-like) 409 689 IPR011009 -
Phac8g00628 720 SMART LRR_typ_2 254 278 IPR003591 -
Phac8g00628 720 SMART LRR_typ_2 110 134 IPR003591 -
Phac8g00628 720 SMART LRR_typ_2 86 109 IPR003591 -
Phac8g00628 720 SMART LRR_typ_2 158 182 IPR003591 -
Phac8g00628 720 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 391 506 - -
Phac8g00628 720 Gene3D Ribonuclease Inhibitor 22 340 IPR032675 -
Phac8g00628 720 Pfam Protein kinase domain 432 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00628 720 SMART LRR_sd22_2 110 127 - -
Phac8g00628 720 SMART LRR_sd22_2 182 208 - -
Phac8g00628 720 SMART LRR_sd22_2 86 107 - -
Phac8g00628 720 SMART LRR_sd22_2 134 160 - -
Phac8g00628 720 SMART LRR_sd22_2 230 262 - -
Phac8g00628 720 FunFam MDIS1-interacting receptor like kinase 2 507 696 - -
Phac8g00628 720 Pfam Leucine rich repeat 136 195 IPR001611 GO:0005515
Phac8g00628 720 ProSitePatterns Tyrosine protein kinases specific active-site signature. 552 564 IPR008266 GO:0004672|GO:0006468
Phac8g00628 720 Gene3D Phosphorylase Kinase; domain 1 388 506 - -
Phac8g00628 720 Pfam Leucine Rich repeat 111 126 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00628 Phac-Chr8 4018189 4020936 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00628 77 600 Receptor kinase-like Gene Family AT4G08850 38.993 1.31e-113 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g00628 Pkinase 5.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00628 - - vum:124822324 904.049