Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00618 ATGGGGCTTGGGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGTAAGTCAAAGGTAAAGATGCAAAAGGCTGGTGCAGAAAAGGAAATTGGGTGCTGTGTTAAATTCTGTTTCATTGGGAGCTGTATACCTTCAAGATCAAAGGTTGATACTTCCATCAGTGGCACTAGTGCTAACAGTGCAGTGGAAAAAACATCTGCTTGTGAGAAAAACAAGAAGGAAACAAATGCTCTTCCAGGGTCCTCTACAACAACCAGTAATGCAGAAAGTATCCCTTCCACCCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAATGAGCTTAAGTTGGCCACTAGGAATTTCAGACCTGAGAGTCTTCTTGGTGAGGGAGGATTTGGATGTGTTTTCAAGGGTTGGATTGAAGAAAATGGTACTGCACCTGTGAAACCTGGTACTGGGCTTACTGTAGCAGTGAAAACTCTCAACCATGATGGGCTTCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTTGGTGACCTCGTCCATTCGAATCTGGTCAAATTGGTTGGTTTCTGTATTGAAGATGACCAAAGATTGTTGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAGGTCGTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTTCTTTTCTCCATGAAGAAGCTCAGCGGCCTGTAATCTATCGTGATTTTAAGACATCTAATATTCTGTTAGATGCGGAATACAATGCAAAGCTCTCTGATTTTGGACTAGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCAACGAGAGTCATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGGCATTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTGGTGCTACTAGAAATGCTGACTGGCCGGCGATCCATCGATAAGAATAGACCAAATGGGGAACACAATCTTGTGGAGTGGGCAAGACCTGTACTTGGGGACCGGAGGATGATACTACGGATTATTGATCCTCGGCTTGAAGGTCACTTCTCTGTTAAAGGGGCACAGAAGGCTGCCCAGTTGGCTGCTCAATGCCTTTGCCGTGATCCAAAATCCAGACCTATGATGAGTGATGTTGTTCAAGCTCTGAAGCATTTGCAAAACCTTAAGGACATGGCTATCTCAACTTATCATTTCCAGGTTGCCCGAGTAGATCGAACCATGTCCATGCCAACTTCTAAAAATGGTATGCAAGCACAGTTAACAATATCAAAAAAGGGTCAACCTGCAAGGTCCTTGTCAAGTCCAAAAGGTCCTAATGGTTCTCCATATCATCATTATATCAAGTCACCAAAACCTAATGGATAA 1428 0.4335 MGLGNNAIQAGSLDVGKSKVKMQKAGAEKEIGCCVKFCFIGSCIPSRSKVDTSISGTSANSAVEKTSACEKNKKETNALPGSSTTTSNAESIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHSNLVKLVGFCIEDDQRLLVYECMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLSFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRMILRIIDPRLEGHFSVKGAQKAAQLAAQCLCRDPKSRPMMSDVVQALKHLQNLKDMAISTYHFQVARVDRTMSMPTSKNGMQAQLTISKKGQPARSLSSPKGPNGSPYHHYIKSPKPNG* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00618 475 MobiDBLite consensus disorder prediction 430 459 - -
Phac8g00618 475 CDD STKc_IRAK 129 406 - -
Phac8g00618 475 FunFam Probable serine/threonine-protein kinase PBL8 209 423 - -
Phac8g00618 475 MobiDBLite consensus disorder prediction 430 475 - -
Phac8g00618 475 Pfam Protein kinase domain 126 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00618 475 Gene3D Transferase(Phosphotransferase) domain 1 209 426 - -
Phac8g00618 475 FunFam Serine/threonine-protein kinase BIK1 90 208 - -
Phac8g00618 475 Gene3D Phosphorylase Kinase; domain 1 103 208 - -
Phac8g00618 475 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Phac8g00618 475 ProSiteProfiles Protein kinase domain profile. 123 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00618 475 SUPERFAMILY Protein kinase-like (PK-like) 109 432 IPR011009 -
Phac8g00618 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Phac8g00618 475 MobiDBLite consensus disorder prediction 65 96 - -
Phac8g00618 475 MobiDBLite consensus disorder prediction 76 96 - -
Phac8g00618 475 PANTHER OS01G0588500 PROTEIN-RELATED 78 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00618 Phac-Chr8 3946546 3951217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00618 81 419 Glycoside Hydrolase AT3G07070 51.989 5.18e-118 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phac8g00618 Pkinase 7.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00618 - - vum:124829441 895.19