Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac8g00611 | ATGGAAATGATGAAAGATAACATTATAGAGGTGAGCGTTGGGAAGAGCCAAATGTCCATTGCAGAAGGTGAGCTGCAAGCAACACGGTGTGTCAAGAGACGAAGAAGAGAAGTTGGTGCAGCAGTTAGCAGTGATGATAACAACCAGCAGCAGTTATCAAAACAACATGCTGGTGAAAATTCTACAATCAACACAACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGACATAGGTGGACTGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAAAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCAGCTGCCAGAGCATATGATTTAGCCGCACTTAAGTACTGGGGAACTTCAACTTTCACCAATTTTCCAATATCTGATTACGGGAAAGATATGGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTATCTTGGCACCTACGGCACCCAAGAGGAAGCGGCACGAGCTTATGACTTAGCAGCCATTGAGTACAGAGGGATTAATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTGGAGGAGGAAGCACCCCAGAAGCAAAACTTGAAGCACATGCAGTAGCAGAGGGTCAAAAGGTGGCATCCCCATCTAATTATGCTCTAACAGAAGACTCAAAATCTTCGGCCATTCACAACAGTTTTTTCAGTCTAGATTCTCTGGATTCCCCAGTAGGGCAAGAAAATTTTGGAAATAAAACCTACTCATTCTCAAGCAGTAAGTCATCTTCTCCCACAGCACTTGGCCTTCTTCTTCGCTCTTCGTTGTTCAGAGAATTAGTTGAAAAAAATTCAAATGTATCTGGAGATGAAGCTGATGGGGAAGTTAGAAAGGGTGAACAGCCACAGATAGCTAGTGATGATGATCTGGGTGGAATCTTCTTTGACAGCATTGGTGATATCCCATTTGTCTGTGATCCCATTAGATACAACTTGGAATTGCAAGAAAGAGACCTGCAATCAATATTTTGA | 1176 | 0.4218 | MEMMKDNIIEVSVGKSQMSIAEGELQATRCVKRRRREVGAAVSSDDNNQQQLSKQHAGENSTINTTKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYGKDMEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDLAAIEYRGINAVTNFDLSTYIKWLKPGGGSTPEAKLEAHAVAEGQKVASPSNYALTEDSKSSAIHNSFFSLDSLDSPVGQENFGNKTYSFSSSKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVRKGEQPQIASDDDLGGIFFDSIGDIPFVCDPIRYNLELQERDLQSIF* | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac8g00611 | 391 | SUPERFAMILY | DNA-binding domain | 70 | 139 | IPR016177 | GO:0003677 | |
Phac8g00611 | 391 | CDD | AP2 | 172 | 233 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | SMART | rav1_2 | 71 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | SMART | rav1_2 | 173 | 237 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | MobiDBLite | consensus disorder prediction | 335 | 356 | - | - | |
Phac8g00611 | 391 | SUPERFAMILY | DNA-binding domain | 172 | 233 | IPR016177 | GO:0003677 | |
Phac8g00611 | 391 | Gene3D | AP2/ERF domain | 172 | 233 | IPR036955 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | Gene3D | AP2/ERF domain | 70 | 139 | IPR036955 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | MobiDBLite | consensus disorder prediction | 38 | 74 | - | - | |
Phac8g00611 | 391 | Pfam | AP2 domain | 172 | 223 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | Pfam | AP2 domain | 70 | 129 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | PRINTS | Ethylene responsive element binding protein signature | 213 | 233 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | PRINTS | Ethylene responsive element binding protein signature | 72 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | ProSiteProfiles | AP2/ERF domain profile. | 71 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | CDD | AP2 | 70 | 139 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | MobiDBLite | consensus disorder prediction | 42 | 70 | - | - | |
Phac8g00611 | 391 | ProSiteProfiles | AP2/ERF domain profile. | 173 | 231 | IPR001471 | GO:0003700|GO:0006355 | |
Phac8g00611 | 391 | MobiDBLite | consensus disorder prediction | 335 | 352 | - | - | |
Phac8g00611 | 391 | FunFam | AP2-like ethylene-responsive transcription factor | 172 | 233 | - | - | |
Phac8g00611 | 391 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 46 | 301 | - | - | |
Phac8g00611 | 391 | FunFam | AP2-like ethylene-responsive transcription factor | 70 | 139 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac8g00611 | Phac-Chr8 | 3908003 | 3910023 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac8g00611 | 67 | 267 | AP2-EREBP Transcription Factor Family | AT5G57390 | 62.136 | 5.80e-84 | 261 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Phac8g00611 | AP2 | 8.5e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac8g00611 | - | - | gmx:100792612 | 660.988 |