Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00611 ATGGAAATGATGAAAGATAACATTATAGAGGTGAGCGTTGGGAAGAGCCAAATGTCCATTGCAGAAGGTGAGCTGCAAGCAACACGGTGTGTCAAGAGACGAAGAAGAGAAGTTGGTGCAGCAGTTAGCAGTGATGATAACAACCAGCAGCAGTTATCAAAACAACATGCTGGTGAAAATTCTACAATCAACACAACAAAGAGAAGCTCAAAATTTCGTGGTGTTAGCAGACATAGGTGGACTGGTCGGTATGAAGCTCACTTGTGGGACAAACTCTCTTGGAACATAACACAGAAGAAAAAAGGGAAGCAAGTTTACCTTGGGGCTTATGATGAAGAAGAATCAGCTGCCAGAGCATATGATTTAGCCGCACTTAAGTACTGGGGAACTTCAACTTTCACCAATTTTCCAATATCTGATTACGGGAAAGATATGGAAATAATGCAGACTATGACCAAAGAGGAGTATTTGGCCACTTTAAGGAGAAAGAGCAGTGGCTTTTCAAGAGGTGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGAATAGGAAGGGTTTTTGGAAACAAATATCTCTATCTTGGCACCTACGGCACCCAAGAGGAAGCGGCACGAGCTTATGACTTAGCAGCCATTGAGTACAGAGGGATTAATGCTGTAACAAACTTTGATTTGAGCACTTACATAAAATGGTTAAAGCCTGGAGGAGGAAGCACCCCAGAAGCAAAACTTGAAGCACATGCAGTAGCAGAGGGTCAAAAGGTGGCATCCCCATCTAATTATGCTCTAACAGAAGACTCAAAATCTTCGGCCATTCACAACAGTTTTTTCAGTCTAGATTCTCTGGATTCCCCAGTAGGGCAAGAAAATTTTGGAAATAAAACCTACTCATTCTCAAGCAGTAAGTCATCTTCTCCCACAGCACTTGGCCTTCTTCTTCGCTCTTCGTTGTTCAGAGAATTAGTTGAAAAAAATTCAAATGTATCTGGAGATGAAGCTGATGGGGAAGTTAGAAAGGGTGAACAGCCACAGATAGCTAGTGATGATGATCTGGGTGGAATCTTCTTTGACAGCATTGGTGATATCCCATTTGTCTGTGATCCCATTAGATACAACTTGGAATTGCAAGAAAGAGACCTGCAATCAATATTTTGA 1176 0.4218 MEMMKDNIIEVSVGKSQMSIAEGELQATRCVKRRRREVGAAVSSDDNNQQQLSKQHAGENSTINTTKRSSKFRGVSRHRWTGRYEAHLWDKLSWNITQKKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYGKDMEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYGTQEEAARAYDLAAIEYRGINAVTNFDLSTYIKWLKPGGGSTPEAKLEAHAVAEGQKVASPSNYALTEDSKSSAIHNSFFSLDSLDSPVGQENFGNKTYSFSSSKSSSPTALGLLLRSSLFRELVEKNSNVSGDEADGEVRKGEQPQIASDDDLGGIFFDSIGDIPFVCDPIRYNLELQERDLQSIF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00611 391 SUPERFAMILY DNA-binding domain 70 139 IPR016177 GO:0003677
Phac8g00611 391 CDD AP2 172 233 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 SMART rav1_2 71 143 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 SMART rav1_2 173 237 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 MobiDBLite consensus disorder prediction 335 356 - -
Phac8g00611 391 SUPERFAMILY DNA-binding domain 172 233 IPR016177 GO:0003677
Phac8g00611 391 Gene3D AP2/ERF domain 172 233 IPR036955 GO:0003700|GO:0006355
Phac8g00611 391 Gene3D AP2/ERF domain 70 139 IPR036955 GO:0003700|GO:0006355
Phac8g00611 391 MobiDBLite consensus disorder prediction 38 74 - -
Phac8g00611 391 Pfam AP2 domain 172 223 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 Pfam AP2 domain 70 129 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 PRINTS Ethylene responsive element binding protein signature 213 233 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 ProSiteProfiles AP2/ERF domain profile. 71 137 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 CDD AP2 70 139 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 MobiDBLite consensus disorder prediction 42 70 - -
Phac8g00611 391 ProSiteProfiles AP2/ERF domain profile. 173 231 IPR001471 GO:0003700|GO:0006355
Phac8g00611 391 MobiDBLite consensus disorder prediction 335 352 - -
Phac8g00611 391 FunFam AP2-like ethylene-responsive transcription factor 172 233 - -
Phac8g00611 391 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 46 301 - -
Phac8g00611 391 FunFam AP2-like ethylene-responsive transcription factor 70 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00611 Phac-Chr8 3908003 3910023 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00611 67 267 AP2-EREBP Transcription Factor Family AT5G57390 62.136 5.80e-84 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Phac8g00611 AP2 8.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00611 - - gmx:100792612 660.988