Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00604 ATGTCTAGCCCTGGTAGTCCACAGATAGAAGAGAAGAGAATTACAAAGGAAGATAAAGTCAAATCTGCTAAAACTGAGATGGGTGAGGTGAAGGAAGAAAATGAGAGATTGAAGAAGACGCTGGAAAGAGTAGAAAAGGATTACCACTCCCTTCAACTCCGTTTCTTTGACATCCTTCACAAAGATGTTTCAAAGAAGGGTGTGGTTGATTCATCTACTTCCCATGAAGATCAAAGTGAAGAGCCTGAGTTTGTCTCACTTTGCCTTGGAAGGACTCCAACGGAGCCTAAGAAGGAGGCAATAATTGGAAACTCCAACAAACCATCAGAAAAAGAGGTTGGACCCAACCTTACTCTTGGATTAGACTCCAAACACCTGTTGGAGATGGAAGTTGTGTCTGATTTGAGTCCAATGAACAGCTCAGAAGAACCAAAGGAAACGGAAACAGAGGGAACATTGTCAACAAATCAATCAGCAAAAGTGATAAATGTACATACTGACGTTTCAGATCAAATGCCAGCCAAGAGAGCAAGGGTATCTGTGAGAGCTAGATGTGATACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAGGGAAATCCATGTCCGAGGGCATACTATCGTTGCACAGTTGCACCAACATGCCCAGTTAGGAAGCAGGTGCAAAGGTGTTCCGAGGACCTGTCCATCTTAATCACAACCTATGAAGGGACCCACAACCACAAACTTCCAGTCTCAGCCACAGCCATGGCTTCAACCACTTCTGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCACACCTTCCAAGCCACATTTCTGCATCTTTTGGAAATGCTCCTACCACACTACTCAATGGTCTAAGTTTCAGTGACCAGTTTCATGAATCAAGAGCCAAACAAATCTTCTCACCACCAAACCATGCCTCATCACATACATTCTCAACAATCACTCTAGACCTGACTTCTTCAGCTCCTTCCTCCTCATCAACTCAATTCCACCACGGCTTACCTTCAACCATGGCTTCAATTTCAAACCCAAGATCCTCAGCTAGTCTCAGCTTTTGTTCACCGGAGCATAACTTCATACCATCCATTTGGGGTAAGGGGTTCCATGACAATGGCACAACCACAACACCAATTGACAGAGTCCCCACAAGGCCAATTATGCAGCCAAATAATTTCCTACAACATTTCTACCAACAACGCATAACAAGCCAAACTCCCTCCAGAGAAGCTTTGGCAGAAACAATAACCAAAGCAATCAGCACAGACCCGAGTTTTCGTTCAGTAATAGCTGCTGCAGTTTCATCAATAGTGGAACATGGATCAAACAGTGGTAAACAAGAGGTATCAGAGAATATTCTTGGTTCAGGGTTGAACTTGAAACTTGGGGAGCATCATCAATCGGCTTCACCCAGTCCCTTGAACCAGAACGGGAAAGGATGCTTAACAGGCTACTTCAAAAGTTTATCCTCTAAGAGTTCTGAGGCTGGAAACGTCCTTCTTCTCCAACCACCATTGCCGTTTTCTTTCTCCAAGAGTGTCACAAATCAGATCAACCGCTATGTTCCAGAAATGAACACGCATCACTAG 1620 0.4414 MSSPGSPQIEEKRITKEDKVKSAKTEMGEVKEENERLKKTLERVEKDYHSLQLRFFDILHKDVSKKGVVDSSTSHEDQSEEPEFVSLCLGRTPTEPKKEAIIGNSNKPSEKEVGPNLTLGLDSKHLLEMEVVSDLSPMNSSEEPKETETEGTLSTNQSAKVINVHTDVSDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPTCPVRKQVQRCSEDLSILITTYEGTHNHKLPVSATAMASTTSAAASMLLSGSSTSHLPSHISASFGNAPTTLLNGLSFSDQFHESRAKQIFSPPNHASSHTFSTITLDLTSSAPSSSSTQFHHGLPSTMASISNPRSSASLSFCSPEHNFIPSIWGKGFHDNGTTTTPIDRVPTRPIMQPNNFLQHFYQQRITSQTPSREALAETITKAISTDPSFRSVIAAAVSSIVEHGSNSGKQEVSENILGSGLNLKLGEHHQSASPSPLNQNGKGCLTGYFKSLSSKSSEAGNVLLLQPPLPFSFSKSVTNQINRYVPEMNTHH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00604 539 Pfam WRKY DNA -binding domain 191 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00604 539 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 457 IPR044810 GO:0003700
Phac8g00604 539 MobiDBLite consensus disorder prediction 134 154 - -
Phac8g00604 539 MobiDBLite consensus disorder prediction 1 36 - -
Phac8g00604 539 Coils Coil 20 54 - -
Phac8g00604 539 Gene3D WRKY domain 175 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00604 539 FunFam probable WRKY transcription factor 31 175 252 - -
Phac8g00604 539 SMART WRKY_cls 190 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00604 539 SUPERFAMILY WRKY DNA-binding domain 183 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00604 539 ProSiteProfiles WRKY domain profile. 185 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00604 539 MobiDBLite consensus disorder prediction 10 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00604 Phac-Chr8 3871282 3874240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00604 27 499 WRKY Transcription Factor Family AT5G15130 42.745 3.92e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g00604 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00604 - - gmx:100780402 805.438