Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00593 ATGGCCTTTCCACCTTCTCACAGCTTCACGTTTCACACTCATGAAGAAGATCACCACCACCTCCCTTCAACCTCTCTCAACGCCTACCCCTCTTTGCCACCACAACACTTTCAAGGGGGTGCACCACCATTCATGTTGAAGCGGTCCATGTCGTTTTCAGGCATTGAGAACAAGTGCGATGAGGTGAACGGAGATGATGGGTTATCCGACGATGGGAACTTTCAATGTGGGGAGAAGAAAAAGAGGCTGAATTTGGAACAGTTAAAGGCTCTTGAGAAGAGTTTTGAGTTGGCGAACAAGCTTGAGCCAGAAAGAAAAGTGCAGTTAGCTAAGGCTTTGGGGTTGCAGCCAAGACAAATTGCCATATGGTTTCAGAACAGAAGGGCCAGATGGAAAACCAAGCAATTGGAGAAGGAATATGAAGCTCTCAAGAAGCAGTTTGAGGGAGCTAAGGCTGATAATGATGTTCTTAAGATTCAGAATCAGAAACTACAGGCAGAGTTAGAAGCAGTAAAAAGTAGGGGTTGGTGTGAAGCTGGAATAATCAGCCTTAAGAAAGAAACTGAGGGTTCATGGAGCAATGGAAGTGAGAACAGCTCAGACATTAATTTAGATCTCTCAAGAGCACCAATTTCGAATAATCCTATATCTTGTCAAGCACCCTATCCCACCAGCATAACTCAGATCCTTCAATATTCGTCAAAACCAGACTTTCAGGATGATGACTTCTGCAACGTGATTCACAACATTGATGTACAACAAAACTTTTGGCCCTGGCCTGGTCAACACAACCACCACTTCCATTGA 807 0.4449 MAFPPSHSFTFHTHEEDHHHLPSTSLNAYPSLPPQHFQGGAPPFMLKRSMSFSGIENKCDEVNGDDGLSDDGNFQCGEKKKRLNLEQLKALEKSFELANKLEPERKVQLAKALGLQPRQIAIWFQNRRARWKTKQLEKEYEALKKQFEGAKADNDVLKIQNQKLQAELEAVKSRGWCEAGIISLKKETEGSWSNGSENSSDINLDLSRAPISNNPISCQAPYPTSITQILQYSSKPDFQDDDFCNVIHNIDVQQNFWPWPGQHNHHFH* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00593 268 FunFam Homeobox-leucine zipper protein ATHB-13 70 138 - -
Phac8g00593 268 SUPERFAMILY Homeodomain-like 72 136 IPR009057 -
Phac8g00593 268 SMART HOX_1 77 138 IPR001356 GO:0003677
Phac8g00593 268 Coils Coil 126 174 - -
Phac8g00593 268 Gene3D - 74 144 - -
Phac8g00593 268 MobiDBLite consensus disorder prediction 1 34 - -
Phac8g00593 268 CDD homeodomain 79 135 IPR001356 GO:0003677
Phac8g00593 268 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
Phac8g00593 268 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 49 213 IPR045224 GO:0003700
Phac8g00593 268 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Phac8g00593 268 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Phac8g00593 268 Pfam Homeobox associated leucine zipper 134 173 IPR003106 GO:0006355|GO:0043565
Phac8g00593 268 PRINTS Lambda-repressor HTH signature 114 130 IPR000047 GO:0003677
Phac8g00593 268 PRINTS Lambda-repressor HTH signature 105 114 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00593 Phac-Chr8 3810611 3812925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00593 1 260 Homeobox Transcription Factor Family AT5G15150 48.611 7.15e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac8g00593 Homeodomain 9.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00593 K09338 - gmx:100797920 395.971