Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00585 ATGGGAAGACCACCTTGTTGTGACAAAGAAGGAGTCAAGAAAGGGCCTTGGACTCCTGAAGAAGACATCGAATTGGTATCTTATATACAGGAACATGGTCCTGGCAATTGGAGAGCTGTTCCTACCAAGACAGGGTTGTCAAGATGTAGTAAGAGTTGTAGACTTAGATGGACAAATTACCTCAGACCAGGAATCAAACGTGGGAACTTCACAGAACAAGAGGAGAAGATGATAATTCACCTTCAAGATCTTTTAGGAAATCGATGGGCTGCAATAGCTTCATACCTTCCACAGAGAACAGATAACGACATCAAGAACTATTGGAACACCCATTTGAGGAAGAAGGTGAAGAAGTTGTTTCAAACAGGCAATGAAGGTAGCTTGGGAGAAGGGTTTTCAGCCTCAAGGCAAATTCCTAGAGGACAGTGGGAAAGAAGGCTTCAAACTGATATCCAAATGGCAAAAAGAGCTCTCAGTGAAGCTCTCTCTCCAGAAAAGCCATCTTGTCTATCTGGATCAAACTCAAATCCTTCAGATAGTAGTAGCTCATTCTCTTCCACCAAACCATCTCAATCTTTATGCTATGCTTCCAGTGCTGAGAACATAGCTCGCATGTTGAAGGGTTGGATGAAAAGTCCACCAAAGTCCTCAAGAACCAACTCATCTGTGACTCAGAACTCCTTCAACAACTTAGTGACAGCAGGTGCTGATACTGCTTCTAGTGGAGCAAAGGGACTGAGCAGTGTTGAATTGTCTGAGAATTTTGAATCCCTGTTTGAGTTTCATCAGTCTTTGGAGTCCTCAGACTCTGATCAGTTCTCTCAGTCCTTTTCTCCCGAGGCCACTGTTTTGCAAGATGAAAGCAAACCTGATATTGGTGCAGAAATAATGCCATTCTCTTTGCTTGAGAAATGGCTTCTTGACGAGACTGCTTGTCAAGAGAAAGTTGGTTGTGGTGATGTCAAATTTTTTTAA 975 0.4277 MGRPPCCDKEGVKKGPWTPEEDIELVSYIQEHGPGNWRAVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKVKKLFQTGNEGSLGEGFSASRQIPRGQWERRLQTDIQMAKRALSEALSPEKPSCLSGSNSNPSDSSSSFSSTKPSQSLCYASSAENIARMLKGWMKSPPKSSRTNSSVTQNSFNNLVTAGADTASSGAKGLSSVELSENFESLFEFHQSLESSDSDQFSQSFSPEATVLQDESKPDIGAEIMPFSLLEKWLLDETACQEKVGCGDVKFF* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00585 324 Gene3D - 13 66 - -
Phac8g00585 324 CDD SANT 69 112 IPR001005 -
Phac8g00585 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phac8g00585 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phac8g00585 324 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Phac8g00585 324 CDD SANT 16 61 IPR001005 -
Phac8g00585 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Phac8g00585 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phac8g00585 324 SMART sant 13 63 IPR001005 -
Phac8g00585 324 SMART sant 66 114 IPR001005 -
Phac8g00585 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Phac8g00585 324 MobiDBLite consensus disorder prediction 166 190 - -
Phac8g00585 324 FunFam MYB-related transcription factor 13 66 - -
Phac8g00585 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 248 - -
Phac8g00585 324 MobiDBLite consensus disorder prediction 269 283 - -
Phac8g00585 324 MobiDBLite consensus disorder prediction 161 190 - -
Phac8g00585 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Phac8g00585 324 Gene3D - 69 127 - -
Phac8g00585 324 MobiDBLite consensus disorder prediction 269 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00585 Phac-Chr8 3701116 3702862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00585 1 317 MYB Transcription Factor Family AT5G62470 51.801 1.20e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g00585 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00585 K09422 - gmx:780543 523.087