Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00583 ATGGACATAACCCCAACAACAACGATAAACAACACCACTCCCAGTGCAACAACAAAATCCCCAGACCATGACACCGAAACACCCACCAGGATCAACACCCCCACCGCCACAAAAGCCTTGTCTTTCTCCAACGGGGTCCTCAAGCGCCACCATCACCACCACCACCACCACCACCCCATGTCCGCCGCCGTCACCTACAAAGAATGCCTCAAAAATCACGCTGCCAACTTGGGTGGCCACGCCTTAGATGGCTGCGGCGAGTTCATGCCGTCCCCCACAGCCACTGCTGCCGACCCCAGCTCCATTAAATGTGCAGCCTGCGGCTGCCACCGCAACTTCCACCGCCGCGAGCCGGATGAGCCGCCCATCGCATCCACCACGCACGTGATCGAGTACCAGCCGCACCATCGCCACCACCCACCGCCTCCGTTCCAGGCGGCAGCGGCGGCGAATCGAAGCCCGAATTCCGCATCCCCGCCGCCGATCTCCTCGTCTTACTACCCCTCCGCGCCGCACATGCTCCTCGCCCTCTCCGCTGGTCTCGCCGCTCCGCCGGAGAGCACGGCCGCACCCTCCACTGCGCTCACCAGAAAGCGCTTCAGAACCAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCATAAGTTCGCTGATAAAGTAGGGTGGAAGATGCAGAAGAGAGACGAAGATTTGGTTCACGAGTTTTGCAACGAGATTGGCGTGGATAGAAGCGTTCTCAAGGTTTGGATGCACAACAACAAAAACACCTTGGCCAAAAAAGATAATAATGTTAATATTATTAGCAATGATGATATTACTAATAATATTAATGATAATGATGCAAATGGGGCTGCCAAGGGTTTTGAGGACCCTAGTAGCAGCATCGGTGGTGGTGCTGAAGATCGTGGTGAGGATCCGAGTCGCAATCACTTTGGTGGGGTGAACGGGTCTTCTTCTACTTCTTGA 963 0.5545 MDITPTTTINNTTPSATTKSPDHDTETPTRINTPTATKALSFSNGVLKRHHHHHHHHHPMSAAVTYKECLKNHAANLGGHALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHRREPDEPPIASTTHVIEYQPHHRHHPPPPFQAAAAANRSPNSASPPPISSSYYPSAPHMLLALSAGLAAPPESTAAPSTALTRKRFRTKFSQEQKEKMHKFADKVGWKMQKRDEDLVHEFCNEIGVDRSVLKVWMHNNKNTLAKKDNNVNIISNDDITNNINDNDANGAAKGFEDPSSSIGGGAEDRGEDPSRNHFGGVNGSSSTS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00583 320 NCBIfam homeobox domain, ZF-HD class 197 254 IPR006455 -
Phac8g00583 320 Gene3D - 185 259 - -
Phac8g00583 320 MobiDBLite consensus disorder prediction 1 36 - -
Phac8g00583 320 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 65 117 IPR006456 -
Phac8g00583 320 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 66 117 IPR006456 -
Phac8g00583 320 MobiDBLite consensus disorder prediction 277 320 - -
Phac8g00583 320 MobiDBLite consensus disorder prediction 149 163 - -
Phac8g00583 320 FunFam Zinc-finger homeodomain protein 2 185 258 - -
Phac8g00583 320 SUPERFAMILY Homeodomain-like 189 258 IPR009057 -
Phac8g00583 320 MobiDBLite consensus disorder prediction 133 164 - -
Phac8g00583 320 Pfam ZF-HD protein dimerisation region 64 118 IPR006456 -
Phac8g00583 320 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 39 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00583 Phac-Chr8 3663092 3665520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00583 1 253 ZF-HD Transcription Factor Family AT5G15210 52.964 1.89e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Phac8g00583 ZF-HD_dimer 2.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00583 - - gmx:100789447 410.994