Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00578 ATGGAGAATTTTATTATAACAGTAATGAGAAGAAGTGAATTAGTGGCAGAAGACAGGGCAGGCTGCAAACCTAATACTCATACTCTTTCACCACAACGCTTCCAAATGGATGGTGGGCACTGCAACCTAAGCCATAACCTTAATATTCCCCTAATCCAAGACCAAACCCAACACTGCCATGAACGGAACAAAAATCCTCAAACAGATTCTTCAAATGGTTATGCCACCACATCTTTCCTCAACACTTGTTTCAATGGACTCAATGCTTTGTCAGCTATATCAGATTTTGTAAAAATGTCAAAAAAGCTCTCGTACAGTTCTTCCTTGATCGCACCGTTGCTTCTCAATGATGAGGAGAAAGCCATAGCCTCCCATCCTTCTGCCAAAAATACTGTATCCTTCTTTCGTACCTGCCTTAATGGACTCAATACAATAGCAGGTGTTGGGATTCTCTCAGTTCCATATGCTCTTGCATCAGGAGGCTGGTTAAGCTTGGCTCTTCTGTTTTCTATTGCCGCTGCTGCATTTTACACGGGCCTTCTCATTAAACGGTGTATGGACAAGAACTCAAACATTAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGGCTAATAGTGTCAGTATCCATGTACACCGAACTCTATTTAGTTTCAATAGGATTCTTGATTCTTGAAGGTGATAACTTGAGCAACATGTTCCCCATTGGGGAAGTTCAGATAGCTGGCTTAGCAATTGGTGGGAAGCAATTCTTTGTGATAATGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTCTCTTATTTATCTGCAAGTGGGGTCTTTGCTTCTGCTGTCATCATCCTTTCAATAACATGGACGGCAACAGTTGATGGAGTTGGTTTTCATCAGAAAGGAACTCTCGTGAATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTACTGTGCACATCCTGTGTTTCCCACATTGTACAATTCTATGACAAACAAACATCAGTTCTCTAACGTCCTGCTTGTATGTTTTATCATAACCACTGTGGGTTATGCATCCATGGCTATAATAGGTTATTTAATGTTTGGTGATGAGGTTGAATCACAAGTAACATTAAACCTGCCTCTGGACAAAGTTAGCTCAAAATTAGCAATATACACTACCTTGGTTAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACAAATGCTTTGAAAGATTTGCTTCCAAGGACGCACAAGAATAGGGTGACCAGCATCTTAGTGAGCACAGTCTTGGTAATGAGCACTACCATTGTTGCCCTTGCTGTTCCTTTCTTTGGGTCTCTCATGTCCCTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAGGAAATTTGGGGGTGAGACGGTAGCCATTATCATGATGATAATGGCAGCCATAGTAATGGCAATTTCTGGGACCTACATCTCTCTCATGGAAATAGTCAAACATTTGTAA 1563 0.4152 MENFIITVMRRSELVAEDRAGCKPNTHTLSPQRFQMDGGHCNLSHNLNIPLIQDQTQHCHERNKNPQTDSSNGYATTSFLNTCFNGLNALSAISDFVKMSKKLSYSSSLIAPLLLNDEEKAIASHPSAKNTVSFFRTCLNGLNTIAGVGILSVPYALASGGWLSLALLFSIAAAAFYTGLLIKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNMFPIGEVQIAGLAIGGKQFFVIMVALIILPTVWLDNLSLLSYLSASGVFASAVIILSITWTATVDGVGFHQKGTLVNWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFIITTVGYASMAIIGYLMFGDEVESQVTLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPRTHKNRVTSILVSTVLVMSTTIVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGGETVAIIMMIMAAIVMAISGTYISLMEIVKHL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00578 520 PANTHER OS05G0424000 PROTEIN-RELATED 141 502 - -
Phac8g00578 520 Pfam Transmembrane amino acid transporter protein 131 509 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00578 Phac-Chr8 3584572 3594669 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00578 133 517 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.845 2.60e-170 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00578 K15015 - gmx:100794374 696.427