Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00566 ATGGGATCCTGTTTCTCAGAGAAGGAGAACCATGTTGTGGTGGAAAGAGAGCACACTGATACCACCCTCAGCGCCATGGTGCTGGGTTCCAACGTGGTGTTTCCCGCGGCTCTAAACGCTGCAATTGAGCTCAACGTGTTTGACATAATTGCGAATGAAGGTTCAGCACAGAGTGGTGGGTTCATGTCACCCTCTGAAATCGCTTCCAAGTTATTAATACCAACACAGAAACAACACCGCTGTGAGTTGGCCAATAGGCTGGAGCGTTTGTTGCGATTGCTTGCTAGCTACTCTCTTCTCGATGTTTCTTCTCGCAGCGACGGAGATGGTGGCAGCGTGAGAGTTTATGGGGTGTCACCGTTGGGTAAATACTTCGTGCGTGATGAAAATGGTGAGGGTTACCTCGCTTCTTTCACCTCGTTTCTGTGTCACTCTGCATTATCCGGGGTGTGGGTGAATTTTAAGGAAGCGATTATTGATCCTGAGATTGACCTTTTCAAGAAGGTTCATGGAATGTCCAAGTTCGAATACTTTGGGAAATATCCTGAAATAAACCACGTATTTAACAGAGCAATGGATGATATTTGCACCACCCATATGAAAAGAATACTTGAAGTATACACAGGATATGAGGGAATATCAACTTTGGTTGATGTAGGAGGTGGAACTGGACAGTGTCTCAAAATGATCATCTCCAAACACCCTTCAATTAAGGGAATTAATTTTGACCTTCCACATGTAATTGAAAACTCACCACCCGTACCAGGGGTTGAGCATGTTGGAGGGAATATGTTTGAAGGTGTGCCACAGGGTGATGCCATCATGCTTAAGGCTATATGCCATAATTGGTCCGATGAAAAAGCTATAGAACTTCTGAGCAATTGTCACAAAGCTTTGCCACCAAAGGGGAAGGTCATTGTTGGGGATTTCATACTGCCAGAAGATCCAGAACCTACAAATGAACATAAAATGATTTCAATACTTGATAACATCATGTTCATTACTCCTGGTGGAAGGGAAAGAACTGAGAAACAATTTCAGAGTCTGGGCAAGAGTTCTGGATTTTCTAGGTTTCAAGTTGTCTGTCGTGCTTTCTCTACTATGGCACTGATGGAATTTTACAAATAA 1128 0.4362 MGSCFSEKENHVVVEREHTDTTLSAMVLGSNVVFPAALNAAIELNVFDIIANEGSAQSGGFMSPSEIASKLLIPTQKQHRCELANRLERLLRLLASYSLLDVSSRSDGDGGSVRVYGVSPLGKYFVRDENGEGYLASFTSFLCHSALSGVWVNFKEAIIDPEIDLFKKVHGMSKFEYFGKYPEINHVFNRAMDDICTTHMKRILEVYTGYEGISTLVDVGGGTGQCLKMIISKHPSIKGINFDLPHVIENSPPVPGVEHVGGNMFEGVPQGDAIMLKAICHNWSDEKAIELLSNCHKALPPKGKVIVGDFILPEDPEPTNEHKMISILDNIMFITPGGRERTEKQFQSLGKSSGFSRFQVVCRAFSTMALMEFYK* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00566 375 Gene3D - 33 203 IPR036388 -
Phac8g00566 375 SUPERFAMILY "Winged helix" DNA-binding domain 19 129 IPR036390 -
Phac8g00566 375 FunFam Caffeic acid 3-O-methyltransferase 4 125 - -
Phac8g00566 375 Pfam Dimerisation domain 37 95 IPR012967 GO:0046983
Phac8g00566 375 CDD AdoMet_MTases 215 312 - -
Phac8g00566 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 375 IPR016461 GO:0008168
Phac8g00566 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 372 IPR029063 -
Phac8g00566 375 Gene3D Vaccinia Virus protein VP39 185 364 IPR029063 -
Phac8g00566 375 PANTHER O-METHYLTRANSFERASE 25 365 IPR016461 GO:0008168
Phac8g00566 375 PIRSF O-mtase 3 375 IPR016461 GO:0008168
Phac8g00566 375 FunFam Caffeic acid O-methyltransferase 129 375 - -
Phac8g00566 375 Pfam O-methyltransferase domain 151 356 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00566 Phac-Chr8 3532397 3534634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00566 14 375 Monolignol Biosynthesis Gene Families AT5G54160 47.934 5.82e-110 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00566 - - gmx:100798295 607.06