Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00562 ATGTCCACTCCCAACGCCCACTCCGACACGGCGCCGCATCCGCGCCCCACCATCACACTCCCTCCGCGTCCCTCCGCGGAAGCCTTTTTCTCCGCCGCCGGCGGCGCTAGCCCCGGTCCCATGACCCTCGTGTCTAGCTTCTTTGGTTCCGATGCCGCCGCCGACTGCCGCTCCTTCTCCCAGCTTCTTGCCGGTGCCATGGCCTCCCCGATGGCCTTCTCCGCCGCCGTGGCCGACAACTCCGGTAAGGACGACGATGGACCCCACAAGGGCTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCCCCTGTATTCACTGTCCCACCCGGGTTGAGCCCTTCTGGGTTTCTTAACTCCCCTGGCTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCTCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGATTACCAGATGCATGCAGTAACAGCTCCTACTGAACCACCTCTACAGCAGCCATCTTTTGCTGTAAATGAAGCTTCGGAGCAGCAGATAGTTTCATCTGTACCAGAAACTAAAAATGCTCAAATGGAAACGTCGGATATCTCGCAGGCTGATAAGAAATATCAGCTGGTTTCCCAGGCCATTGACAAACCTGCAGATGATGGCTATAACTGGCGCAAGTATGGGCAGAAGCAGGTTAAGGGCAGCGAGTATCCACGAAGCTACTACAAATGTACACATCTGAATTGCCTAGTGAAGAAAAAAGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATCATCTATAAAGGTCAGCATAACCATGAAAAGCCTCAGGCAAATAGACGTGTCAAGGATAATAGTGATTCAAATGGAAGTGCAATTGTTCAGCCTAAGTCTGAGTCAAACTCACAAAGTTGGGTTGGACAACAAGTAAACAAGTTTAGTGAAAACATTCCTGATTGTTCAGTTCCTGAAAGTGACCAGATTTCCAATCAAGGGGCACCTAGGCAACTAGTACCTGGGTCAAGTGAGAGCGAGGAAGTGGGTGATGTAGATAATAGGGAAGAGGCAGATGACATTGAGCCAAACCCTAAGAGAAGGAATACTGATCTTGTGGTTTCCGAAGTACCTCTTTCTCAGAAGACTGTAACAGAACCCAAAATTATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGTTACAGGTGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGGAACCCTCATCCGAGGTGA 1278 0.5016 MSTPNAHSDTAPHPRPTITLPPRPSAEAFFSAAGGASPGPMTLVSSFFGSDAAADCRSFSQLLAGAMASPMAFSAAVADNSGKDDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMHAVTAPTEPPLQQPSFAVNEASEQQIVSSVPETKNAQMETSDISQADKKYQLVSQAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKDNSDSNGSAIVQPKSESNSQSWVGQQVNKFSENIPDCSVPESDQISNQGAPRQLVPGSSESEEVGDVDNREEADDIEPNPKRRNTDLVVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPR* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00562 425 FunFam WRKY transcription factor 210 283 - -
Phac8g00562 425 Gene3D WRKY domain 208 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 MobiDBLite consensus disorder prediction 272 378 - -
Phac8g00562 425 MobiDBLite consensus disorder prediction 289 344 - -
Phac8g00562 425 Gene3D WRKY domain 391 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 MobiDBLite consensus disorder prediction 1 32 - -
Phac8g00562 425 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 Pfam WRKY DNA -binding domain 405 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 121 425 IPR044810 GO:0003700
Phac8g00562 425 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 SUPERFAMILY WRKY DNA-binding domain 396 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 ProSiteProfiles WRKY domain profile. 399 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 SUPERFAMILY WRKY DNA-binding domain 221 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g00562 425 MobiDBLite consensus disorder prediction 272 288 - -
Phac8g00562 425 ProSiteProfiles WRKY domain profile. 218 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00562 Phac-Chr8 3506970 3511342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00562 15 425 WRKY Transcription Factor Family AT2G03340 51.131 1.01e-113 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g00562 WRKY 4.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00562 - - gmx:100796679 753.051