Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac8g00561 | ATGTCCACTCCCAACGCCCACTCCGACACGGCGCCGCATCCGCGCCCCACCATCACACTCCCTCCGCGTCCCTCCGCGGAAGCCTTTTTCTCCGCCGCCGGCGGCGCTAGCCCCGGTCCCATGACCCTCGTGTCTAGCTTCTTTGGTTCCGATGCCGCCGCCGACTGCCGCTCCTTCTCCCAGCTTCTTGCCGGTGCCATGGCCTCCCCGATGGCCTTCTCCGCCGCCGTGGCCGACAACTCCGGTAAGGACGACGATGGACCCCACAAGGGCTTCAAGCAGAGCAGACCCATGAATTTGGTCATTGCTCGTTCCCCTGTATTCACTGTCCCACCCGGGTTGAGCCCTTCTGGGTTTCTTAACTCCCCTGGCTTCTTTTCCCCTCAGAGCCCCTTTGGGATGTCTCACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATATGCACATGCAAGCTGATTACCAGATGCATGCAGTAACAGCTCCTACTGAACCACCTCTACAGCAGCCATCTTTTGCTGTAAATGAAGCTTCGGAGCAGCAGATAGTTTCATCTGTACCAGAAACTAAAAATGCTCAAATGGAAACGTCGGATATCTCGCAGGCTGATAAGAAATATCAGCTGGTTTCCCAGGCCATTGACAAACCTGCAGATGATGGCTATAACTGGCGCAAGTATGGGCAGAAGCAGGTTAAGGGCAGCGAGTATCCACGAAGCTACTACAAATGTACACATCTGAATTGCCTAGTGAAGAAAAAAGTTGAGCGTGCCCCTGATGGTCACATAACTGAAATCATCTATAAAGGTCAGCATAACCATGAAAAGCCTCAGGCAAATAGACGTGTCAAGGATAATAGTGATTCAAATGGAAGTGCAATTGTTCAGCCTAAGTCTGAGTCAAACTCACAAAGTTGGGTTGGACAACAAGTAAACAAGTTTAGTGAAAACATTCCTGATTGTTCAGTTCCTGAAAGTGACCAGATTTCCAATCAAGGGGCACCTAGGCAACTAGTACCTGGGTCAAGTGAGAGCGAGGAAGTGGGTGATGTAGATAATAGGGAAGAGGCAGATGACATTGAGCCAAACCCTAAGAGAAGGAATACTGATCTTGTGGTTTCCGAAGTACCTCTTTCTCAGAAGACTGTAACAGAACCCAAAATTATTGTGCAAACAAGAAGCGAAGTTGATCTTTTGGATGATGGTTACAGGTGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGGAACCCTCATCCGAGGAGTTATTACAAATGCACAAGTGCAGGATGCAACGTGCGTAAGCATGTTGAGAGAGCTTCAACGGACCCCAAAGCTGTCATAACCACGTATGAGGGTAAGCATAATCATGATGTGCCTGCTGCTAGAAATAGCAGCCACAACACAGCTAATACCAATTCAGTGCCATTAAAACCGAGTGTCGTACCACCAGAGAAGCACCCTTTGCTTAAAGATATGGACTTTGGAAACAATGACCGAAGACCTGTACATTTGCGCTTAAAAGAAGAGCAAATCATAGTATAA | 1557 | 0.4888 | MSTPNAHSDTAPHPRPTITLPPRPSAEAFFSAAGGASPGPMTLVSSFFGSDAAADCRSFSQLLAGAMASPMAFSAAVADNSGKDDDGPHKGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHMHMQADYQMHAVTAPTEPPLQQPSFAVNEASEQQIVSSVPETKNAQMETSDISQADKKYQLVSQAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCLVKKKVERAPDGHITEIIYKGQHNHEKPQANRRVKDNSDSNGSAIVQPKSESNSQSWVGQQVNKFSENIPDCSVPESDQISNQGAPRQLVPGSSESEEVGDVDNREEADDIEPNPKRRNTDLVVSEVPLSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAARNSSHNTANTNSVPLKPSVVPPEKHPLLKDMDFGNNDRRPVHLRLKEEQIIV* | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac8g00561 | 518 | ProSiteProfiles | WRKY domain profile. | 399 | 464 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | Gene3D | WRKY domain | 208 | 283 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | Gene3D | WRKY domain | 389 | 465 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | FunFam | WRKY transcription factor 33 | 391 | 457 | - | - | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 289 | 344 | - | - | |
Phac8g00561 | 518 | SUPERFAMILY | WRKY DNA-binding domain | 396 | 464 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | FunFam | WRKY transcription factor | 211 | 283 | - | - | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 272 | 376 | - | - | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 461 | 500 | - | - | |
Phac8g00561 | 518 | SMART | WRKY_cls | 223 | 281 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | SMART | WRKY_cls | 404 | 463 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 121 | 477 | IPR044810 | GO:0003700 | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 272 | 288 | - | - | |
Phac8g00561 | 518 | Pfam | WRKY DNA -binding domain | 224 | 280 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | Pfam | WRKY DNA -binding domain | 405 | 461 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | MobiDBLite | consensus disorder prediction | 466 | 482 | - | - | |
Phac8g00561 | 518 | SUPERFAMILY | WRKY DNA-binding domain | 221 | 282 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac8g00561 | 518 | ProSiteProfiles | WRKY domain profile. | 218 | 282 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac8g00561 | Phac-Chr8 | 3505574 | 3511342 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac8g00561 | 15 | 516 | WRKY Transcription Factor Family | AT2G03340 | 52.425 | 2.16e-148 | 433 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac8g00561 | WRKY | 1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac8g00561 | - | - | gmx:100796679 | 926.776 |