Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00545 ATGGCAGCGTTCATAATCACGGTTTCACTGGACGGAACCGCTGATTTCCTAACGGTGCAGGAGGCGATCGACGCCGTGCCACTAGGCAACATTCGCCGGACGGTGATTCGGGTCTCGCCGGGAATCTACCGGCAGCCGGTGTACATCCCCAAAACCAAGAATTTCATCACTCTCGCTGCTCTGTCCCCTGAGGAAACTGTGCTTACCTGGAACAACACTGCCGCCGGAATCAATCACCATCAACCTGCGAGGATGATAGGGACTGGGACCTTCGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACTTTTGAGAATTCTGCCCCTCAGGGTTCGGGGCAAGCAGTTGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACATTGTACTTGCATTACGGTAAACAATATTTGAAAGATTGTTACATTGAAGGAAGTGTGGACTTCATCTTTGGTAATAGCACTGCACTTTTGGAGAACTGTCATATCCATTGCAAGTCTGAGGGCTTCATAACTGCACAAAGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTAAGATGCGTTATCACAGGTAATGGAGGAAATTCTTATGCATATCTTGGGCGACCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCAGTGTATAAAACATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTGTCCACCGAAGCGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCTTTGCAGTTCCTCACACATCCTTTCATCGATCCAGAACCAGATAAACCTTGGCTTGCTCAAAAGATGGCCCTCAGAATTCCATACTCTGCATGA 951 0.4679 MAAFIITVSLDGTADFLTVQEAIDAVPLGNIRRTVIRVSPGIYRQPVYIPKTKNFITLAALSPEETVLTWNNTAAGINHHQPARMIGTGTFGCGSTIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLENCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIKHVGWDNWGKMENERSACFYEYRCFGPGCCPPKRVTWCRELLDEEALQFLTHPFIDPEPDKPWLAQKMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00545 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
Phac8g00545 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Phac8g00545 316 Gene3D - 3 310 IPR012334 -
Phac8g00545 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Phac8g00545 316 FunFam Pectinesterase 2 309 - -
Phac8g00545 316 SUPERFAMILY Pectin lyase-like 2 299 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00545 Phac-Chr8 3443587 3447090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00545 5 309 Carbohydrate Esterase AT5G47500 38.608 2.85e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00545 K01051 - gmx:100786786 635.95