Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00531 ATGTATTCTGAGAATAACTTTATCTTTAAGATTCATCTACTTTTTGAGAAAAACTTCTTCTCTCCACGTTTATTACGTTCTCAAGGTATCACTTGTGAGCAAGCACCTTGCCTCACCATGGAAGGAGCATTACCAGGTGTGAGGAAAGGAGCATGGAGTCAAAGTGAAGATGACCTTCTGAGAGAGTGCGTTCAACTCTACGGTGAAGGAAAATGGCACCTTGTTCCTGGAAGAGCAGGGTTGAACAGATGCCGGAAGAGTTGTAGATTGAGATGGTTGAACTATTTGAAACCAAATATCAAGCGAGGAGATTTTAGTGAAGATGAAATTGATTTGATGATCAGATTGCATAAACTTTTGGGAAACAGATGGTCTCTCATTGCTGGAAGACTTCCGGGGAGAACATCAAACGATGTGAAGAATTACTGGAACACCAACATGCGCCGCAAAGTACACTCTCACAACAAAGATGACGAAAACAACAACAACAACGTAAAAGAATCCGAAACAAGTTGGAAACCTCACCAAGTGATAAAACCTGTGCCTCGAGCTTTGCGAAAAGCATCGCCCTTGGTGCAGGGGAAAGTGATGAGTAGTTCGAAAGTTGGTGTGAGTGAAGGAGTTTCATCAGGGTGTGAGAATTGGTGGGAAACTCTGTTAGATGAGAAGGAAGAGAACACTGCAGTTGACAACATGATGTGGTTCCCTGGTGCCAAAGATGGAGCGTTTGAGCTTTGGGATGAAGAACTTGGTTCTATTGCTTCTGACTTTCTTGCAGAAGCTCAAACATGGAGTGATTTTCTTCTTAATTAA 813 0.4231 MYSENNFIFKIHLLFEKNFFSPRLLRSQGITCEQAPCLTMEGALPGVRKGAWSQSEDDLLRECVQLYGEGKWHLVPGRAGLNRCRKSCRLRWLNYLKPNIKRGDFSEDEIDLMIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTNMRRKVHSHNKDDENNNNNVKESETSWKPHQVIKPVPRALRKASPLVQGKVMSSSKVGVSEGVSSGCENWWETLLDEKEENTAVDNMMWFPGAKDGAFELWDEELGSIASDFLAEAQTWSDFLLN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00531 270 MobiDBLite consensus disorder prediction 150 164 - -
Phac8g00531 270 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 35 171 - -
Phac8g00531 270 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Phac8g00531 270 FunFam Myb transcription factor 49 101 - -
Phac8g00531 270 FunFam Transcription factor MYB113 104 177 - -
Phac8g00531 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 100 IPR017930 -
Phac8g00531 270 SMART sant 101 149 IPR001005 -
Phac8g00531 270 SMART sant 48 98 IPR001005 -
Phac8g00531 270 SUPERFAMILY Homeodomain-like 46 143 IPR009057 -
Phac8g00531 270 CDD SANT 105 147 IPR001005 -
Phac8g00531 270 CDD SANT 51 96 IPR001005 -
Phac8g00531 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 151 IPR017930 -
Phac8g00531 270 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Phac8g00531 270 MobiDBLite consensus disorder prediction 149 173 - -
Phac8g00531 270 Pfam Myb-like DNA-binding domain 102 145 IPR001005 -
Phac8g00531 270 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Phac8g00531 270 Gene3D - 104 176 - -
Phac8g00531 270 Gene3D - 49 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00531 Phac-Chr8 3309539 3339695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00531 46 185 MYB Transcription Factor Family AT1G66370 62.411 1.82e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g00531 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00531 - K16166 pvu:PHAVU_008G038600g 423.705