Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00523 ATGCACACTCTGCGTCATCATCAACTTAGTTTCTTATCTCATATATTTATGCCGCTGACCTTTCTTCTTTCTCCATTATCTCTTTTACAACTCCAATTCGTTATCTCTCTCTCTCTCTCTCACACACACACACACACTCTTTTCCTTAGTCTGCTTCTTCTCTATCAAAAACTGTTCTCACTTTGTAAGAAAATGGGACGATCACCGTGCTGTGACAAGGTGGGTCTAAAGAAAGGACCATGGACGCCAGAAGAAGATCAGAAGCTCTTGGCATATATCGAAGAACATGGGCATGGAAGCTGGCGTGCTTTGCCAGCAAAAGCTGGACTTGAGAGGTGTGGCAAGAGCTGCAGATTGAGATGGACTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTATGCAAGAAGAGCAAACCATCATTCAACTCCATGCACTCTTAGGGAACAGGTGGTCGGCAATAGCAACACATTTGCCAAAGAGAACAGATAATGAGATAAAAAACTACTGGAACACGCATCTGAAGAAAAGGTTAGACAAAATGGGAATTGATCCAGTGACTCACAAGCCCAAGAACGATGCCATTCTCTCCACCGAGGGCCATTCCAAGAGTGCTTCCAACCTAAGCCACATGGCTCAGTGGGAGAGTGCCAGACTCGAAGCAGAAGCAAGATTGGTGAGAGAATCAAAACTACGTACCTCACATTCATCATCACCCTCCCTGCAGCATTCTCTAATTGGCACTTGTGCATCATCATCATCTTCTTCAGCTCCAGTATTACCCTCCTCAACACGTTTTCTTGATCATGCTTATGGTAGCAGTACTAGCACGGTTGCAACTAGGATGAGTGACCTTGAGTCCCCCACTTCTACCTTGTCTGAGAACAATGCGCCACCAATTATGACTAGCGTGATTGAGTTTGTTGGTTCTTCGGAGAGAGGGATGGTGAAGGAAGAAGGAGAGCGAGAGTGGAACAAAGGTTTTCATGAATACAAAGATGGCATGGAGAATTCAATGCCTTTCACGTCTAGTCTGCATGAGATGACAGTGACCATGGCAACCACGTGGGGGTCTAGCACTACCAGTGCAAGTGCACATGCACATGGACATGTTTCTGAGGAGGGATTCACCAACCTTTTGCTCAATTCTAACTCCGATCACCGGAGTTTGTCGTCGGAGGGTGGTGGAGACTCTAATAATAACTGTCATGGTAACAGTAGCGATGGTGTTAACGGTAACGGAAACGAGTTATACGAAGATAACAAGATCTATTGGAACAACATTCTTAATTTGATGAACTGTTCTTCCCCTTCGGATTCACCCATGTTCTGA 1338 0.4492 MHTLRHHQLSFLSHIFMPLTFLLSPLSLLQLQFVISLSLSHTHTHTLFLSLLLLYQKLFSLCKKMGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLERCGKSCRLRWTNYLRPDIKRGKFSMQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLDKMGIDPVTHKPKNDAILSTEGHSKSASNLSHMAQWESARLEAEARLVRESKLRTSHSSSPSLQHSLIGTCASSSSSSAPVLPSSTRFLDHAYGSSTSTVATRMSDLESPTSTLSENNAPPIMTSVIEFVGSSERGMVKEEGEREWNKGFHEYKDGMENSMPFTSSLHEMTVTMATTWGSSTTSASAHAHGHVSEEGFTNLLLNSNSDHRSLSSEGGGDSNNNCHGNSSDGVNGNGNELYEDNKIYWNNILNLMNCSSPSDSPMF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00523 445 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 65 297 - -
Phac8g00523 445 FunFam Transcription factor MYB39 132 200 - -
Phac8g00523 445 CDD SANT 80 125 IPR001005 -
Phac8g00523 445 SUPERFAMILY Homeodomain-like 75 172 IPR009057 -
Phac8g00523 445 Gene3D - 132 205 - -
Phac8g00523 445 MobiDBLite consensus disorder prediction 384 415 - -
Phac8g00523 445 Pfam Myb-like DNA-binding domain 78 125 IPR001005 -
Phac8g00523 445 Pfam Myb-like DNA-binding domain 131 176 IPR001005 -
Phac8g00523 445 MobiDBLite consensus disorder prediction 185 209 - -
Phac8g00523 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 125 IPR017930 -
Phac8g00523 445 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 180 IPR017930 -
Phac8g00523 445 SMART sant 130 178 IPR001005 -
Phac8g00523 445 SMART sant 77 127 IPR001005 -
Phac8g00523 445 Gene3D - 77 130 - -
Phac8g00523 445 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Phac8g00523 445 FunFam MYB-related transcription factor 77 130 - -
Phac8g00523 445 ProSiteProfiles Myb-like domain profile. 126 176 IPR001005 -
Phac8g00523 445 CDD SANT 133 176 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00523 Phac-Chr8 3257163 3260866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00523 65 445 MYB Transcription Factor Family AT3G01140 53.133 1.12e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g00523 Myb_DNA-binding 2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00523 K09422 - gmx:100794047 585.874