Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00522 ATGGAGAACGTTTGCAAAACAAGTAAGGAAAATCAGCAGTTGAAGTTGCCAACAGGTTTTAGATTTCACCCAACAGATGAAGAACTCATAAAACACTACCTCACAAAGAAGGTTGTTGACAACTGTTTCTGTGCTGTGGCCATTGGTGAGGCTGATTTGAACAAGTGTGAGCCATGGAATCTGCCTGGATTGGCTAAAATGGGTGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTTTAAGGGCTAATAGGGCTACTGATGCTGGTTATTGGAAAGCCACAGGGAAAGACAGGGAGATAATAGCGGAAAATGCACTCATTGGGATGAAGAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAAAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGAAACAGAATCAAAACAAATCTTCAAAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAGGGTCCTTGTGGAAAGAAATCGCATGTTCCAAATCGTGAGAGGTTCAATTCCTCTGGAAATGAATCATCATCACCTTCTGCTCAATTGCCTCCTTTGATGGATTCTCCTCCAGACAACAGTGAAACCATAACCACTGCTGGTGAGTTGTCTCAGGTGACCAGCTCTGATCCAAATCAAACTATGGATCGGAACACACATGATGACATTGTTCATAGCTTGGAAACTCCTATGTTGGACTTTTCATCCTCTGCAACTCCTTATGATGTTTTCCCTTCAGGCAAAGCAACCCTTTCAGCCATAAACCAACCAACCCAGATTGCACACCAAATCGGGGACTCACAGTACCCAGATTATTGTTATATGCCTCAAGAACAGTCCTTGAGGATGCTGATGGAAAACCATGAATCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGAGGGAAGAGGCTTTGATGTTGATATCTCATCTGTGTTATACAACAGTGACATGATGCAAAGAATGTTTGAGAATCAAGAACATTCATCAGCTTCTGCAGGACATGTGGACACTGATTGCATGTGGAATTACTGA 1065 0.4235 MENVCKTSKENQQLKLPTGFRFHPTDEELIKHYLTKKVVDNCFCAVAIGEADLNKCEPWNLPGLAKMGETEWYYFCVRDKKYPTGLRANRATDAGYWKATGKDREIIAENALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKQNQNKSSKSEWVVCRVFEKGPCGKKSHVPNRERFNSSGNESSSPSAQLPPLMDSPPDNSETITTAGELSQVTSSDPNQTMDRNTHDDIVHSLETPMLDFSSSATPYDVFPSGKATLSAINQPTQIAHQIGDSQYPDYCYMPQEQSLRMLMENHESSAKQIQKAEFSEGRGFDVDISSVLYNSDMMQRMFENQEHSSASAGHVDTDCMWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00522 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Phac8g00522 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 257 - -
Phac8g00522 354 MobiDBLite consensus disorder prediction 176 223 - -
Phac8g00522 354 Gene3D NAC domain 25 165 IPR036093 GO:0003677|GO:0006355
Phac8g00522 354 ProSiteProfiles NAC domain profile. 16 163 IPR003441 GO:0003677|GO:0006355
Phac8g00522 354 FunFam NAC domain-containing protein 100-like 25 166 - -
Phac8g00522 354 SUPERFAMILY NAC domain 12 163 IPR036093 GO:0003677|GO:0006355
Phac8g00522 354 MobiDBLite consensus disorder prediction 169 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00522 Phac-Chr8 3238523 3241327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00522 14 354 NAC Transcription Factor Family AT5G07680 49.133 1.92e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g00522 NAM 4.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00522 - - gmx:100782172 528.48