Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00521 ATGGGTGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTTTAAGGGCTAATAGGGCTACTGATGCTGGTTATTGGAAAGCCACAGGGAAAGACAGGGAGATAATAGCGGAAAATGCACTCATTGGGATGAAGAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAAAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGAAACAGAATCAAAACAAATCTTCAAAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAGGGTCCTTGTGGAAAGAAATCGCATGTTCCAAATCGTGAGAGGTTCAATTCCTCTGGAAATGAATCATCATCACCTTCTGCTCAATTGCCTCCTTTGATGGATTCTCCTCCAGACAACAGTGAAACCATAACCACTGCTGGTGAGTTGTCTCAGGTGACCAGCTCTGATCCAAATCAAACTATGGATCGGAACACACATGATGACATTGTTCATAGCTTGGAAACTCCTATGTTGGACTTTTCATCCTCTGCAACTCCTTATGATGTTTTCCCTTCAGGCAAAGCAACCCTTTCAGCCATAAACCAACCAACCCAGATTGCACACCAAATCGGGGACTCACAGTACCCAGATTATTGTTATATGCCTCAAGAACAGTCCTTGAGGATGCTGATGGAAAACCATGAATCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGAGGGAAGAGGCTTTGATGTTGATATCTCATCTGTGTTATACAACAGTGACATGATGCAAAGAATGTTTGAGAATCAAGAACATTCATCAGCTTCTGCAGGACATGTGGACACTGATTGCATGTGGAATTACTGA 867 0.4245 MGETEWYYFCVRDKKYPTGLRANRATDAGYWKATGKDREIIAENALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKQNQNKSSKSEWVVCRVFEKGPCGKKSHVPNRERFNSSGNESSSPSAQLPPLMDSPPDNSETITTAGELSQVTSSDPNQTMDRNTHDDIVHSLETPMLDFSSSATPYDVFPSGKATLSAINQPTQIAHQIGDSQYPDYCYMPQEQSLRMLMENHESSAKQIQKAEFSEGRGFDVDISSVLYNSDMMQRMFENQEHSSASAGHVDTDCMWNY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00521 288 MobiDBLite consensus disorder prediction 103 161 - -
Phac8g00521 288 ProSiteProfiles NAC domain profile. 1 97 IPR003441 GO:0003677|GO:0006355
Phac8g00521 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 194 - -
Phac8g00521 288 MobiDBLite consensus disorder prediction 110 157 - -
Phac8g00521 288 Pfam No apical meristem (NAM) protein 2 75 IPR003441 GO:0003677|GO:0006355
Phac8g00521 288 Gene3D NAC domain 1 99 IPR036093 GO:0003677|GO:0006355
Phac8g00521 288 SUPERFAMILY NAC domain 2 97 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00521 Phac-Chr8 3238523 3241327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00521 1 288 NAC Transcription Factor Family AT5G07680 45.051 3.37e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac8g00521 NAM 2.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00521 - - gmx:100782172 412.92