Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00504 ATGTCGGAGGCAAAAGACCCGACGATCAAGCTCTTCGGGAAGACGATCCCCTTGTCAGAGATTACGACTGGATCCGCCGGAGCTCCGGCTTCGTCTTCCGGTGACGTTGTTGATGAGAGTGTTGAACAGAGCCATGCTTCTTCCTCCAACTCCTCGAGGGAGTCTCATACGCGAGAGGAAGGTGTTGTTGACAAGGACTCACTGGGAGAAAAATCAGCTGATAATAAGAAGGAAGACAGATCCCCAACCCAATCATTAGAAGAGGTCAACAATCTAGATACCACCTCTGGAACCTGTGAAGAATCCATTACTCTACCCATTGACAAGGAGACCACTACTTTAAGAACTTCAAAAACTGAAGAAGAACTAAGTGAGACAAGTAAATCACAGGACAAGAACCTCAAAAAACCAGACAAAATACTTCCTTGTCCCCGCTGTAATAGTATGGATACAAAGTTCTGCTACTATAATAACTACAATGTCAACCAACCCCGTCACTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGGGGGACTATGAGGAATGTTCCTGTAGGTGCTGGTCGCAGGAAGAACAAGAGCTCGACTTCTCACTACCGCCAGATAACTGTTCCTGATGCTGCACTCCAGAATCCTCAAATTGACTTGCCAAATGGAGCGTATCATCCTTCCTTGAAATGCAATGGGGCAGTCCTTACATTTGGATCTGATACACCCTTGTGTGAATCGATGACATCGGTTTTGAACCTTGCTGATAAAACCGCGCACAACTATGCCAGAAATGGATTTCATAAACCTGAAGAACTAAAAATTCCTGTTCCACATGCCAGTGGAGAAAAAAGGGATGATCAATCCAATAAATCTTCAGTTACCTCCACAAAGTCAGTGGAAGGTGCAAGCACTAATGGAGCCCAAGAACAAGCTATGCCGAACTCTCATTCTTTCCCACCACAGGTTCCCTACTTTACTGGTAACTCTTGGCCTATTCCATGGAATCCAGTGCAGTGGAGTTCTCCAGTACCGCCGCCTGCCTTTTGTCACCCCGGATTCACCGTGCCGTTCTATCCTGCAGCAGCTTATTGGGGTTGTGCTGTGTCTGGTGCATGGAACATCCCATGGATAGCACAACCGTCCTCACCAAAGGGTGCAACTTCTAACTCTGGCCCTAACTCACCAACCTTGGGTAAACATTCAAGGGAAGACAACATTCTGAAATCAAATGAATCTGGTGGTGGTGAGGATGGACACAACAAAGAAAACAACAAAGAGAAGTGCCTGTGGGTTCCAAAAACTCTAAGGATTGATGACTCGGGAGACGCAGCAAAAAGCACTATATGGACAACACTGGGGATTAGAAATGACAAGGTTGATTCAGTTCCTAGGGAAACACTCTTCAAAGGCTTCCCTTCAAAGCTTGATGAGAAAAACCATTCAATGCAAGCCTCGCCAGTGTTGCAGGCCAATCCGGCTGCATTGTCAAGGTCACTTAACTTTCATGAGACCTCATAG 1512 0.463 MSEAKDPTIKLFGKTIPLSEITTGSAGAPASSSGDVVDESVEQSHASSSNSSRESHTREEGVVDKDSLGEKSADNKKEDRSPTQSLEEVNNLDTTSGTCEESITLPIDKETTTLRTSKTEEELSETSKSQDKNLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSTSHYRQITVPDAALQNPQIDLPNGAYHPSLKCNGAVLTFGSDTPLCESMTSVLNLADKTAHNYARNGFHKPEELKIPVPHASGEKRDDQSNKSSVTSTKSVEGASTNGAQEQAMPNSHSFPPQVPYFTGNSWPIPWNPVQWSSPVPPPAFCHPGFTVPFYPAAAYWGCAVSGAWNIPWIAQPSSPKGATSNSGPNSPTLGKHSREDNILKSNESGGGEDGHNKENNKEKCLWVPKTLRIDDSGDAAKSTIWTTLGIRNDKVDSVPRETLFKGFPSKLDEKNHSMQASPVLQANPAALSRSLNFHETS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00504 503 Pfam Dof domain, zinc finger 138 195 IPR003851 GO:0003677|GO:0006355
Phac8g00504 503 MobiDBLite consensus disorder prediction 1 138 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 379 398 - -
Phac8g00504 503 PANTHER CYCLIC DOF FACTOR 2 1 503 IPR045174 GO:0003700|GO:0006355
Phac8g00504 503 MobiDBLite consensus disorder prediction 52 84 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 18 51 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 289 318 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 275 318 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 379 423 - -
Phac8g00504 503 ProSitePatterns Zinc finger Dof-type signature. 143 179 IPR003851 GO:0003677|GO:0006355
Phac8g00504 503 MobiDBLite consensus disorder prediction 113 138 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 399 423 - -
Phac8g00504 503 ProSiteProfiles Zinc finger Dof-type profile. 141 195 IPR003851 GO:0003677|GO:0006355
Phac8g00504 503 MobiDBLite consensus disorder prediction 85 112 - -
Phac8g00504 503 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00504 Phac-Chr8 3154739 3158800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00504 6 503 C2C2-Dof Transcription Factor Family AT5G39660 43.462 4.96e-111 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac8g00504 zf-Dof 2.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00504 - - gmx:100788247 814.298