Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00496 ATGCCCAACACCTTCTCCCTCCTCTGGTGGATTGGCAAAAAGTTGCGAAGAAGGAACACAGTTAGTAATGGAGAGAGTGGGAGCAACGAGAACGTCGTCGGTGCCGTTGTTGTAGATGACAATCCATTTGGCAGCACGGTAGAGTGTTACGCTTGCACGCAGGTTGGCGTGCCGGTGTTTCACTCCACCAGCTGCGACAGTTTTAACCAGCCGCAATGGGAGGCTTCGGCCGGCTCCTCCCTTGTTCCGATCCAGAATCGGCCGAACAAGGTTCTCGGGTTTCGGACCGTATCCGGTTCGAATATTGGACCGTTTGGGAGGGTTTTGGATCCGCGGAGCAAGCGCGTGCAAAAGTGGAACCGCGCGCTGCTGCTGGCGCGTGGGGTGGCGTTGGCGATTGACCCGCTGTTCTTCTACTCGCTGTCGATCGGGAGGGAGGGGTCGCCGTGCCTTTACATGGACGGAGGGCTGGCAGCGATGGTGACGGTGGCGCGGACGTGCGTGGACGCGGTGCATCTCTTGCACGTGTGGCTGCAGTTCCGGCTGGCGTACGTGTCGCGCGAGTCGCTGGTAGTGGGGTGCGGGAAACTGGTGTGGGACGCGCGTGAGATCGCGTCGCATTACCTGCGATCGTTGAAGGGATTCTGGTTCGACGCATTCGTGATCCTCCCAGTTCCCCAGGCTGTGTTTTGGTTGGTAGTGCCAAAATTGATCAGAGAAGAGCGAATTAAAATCATTATGACCATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACGGGCTACATCTTTGGTACCATTTGGTGGGGCTTTGGTCTCAATCTCATAGCTTATTTTATTGCTTCCCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGAGTTGCGTCATGCCTTCGACAGCAGTGTGAGAGAACTAATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGGTATGCTACCAGTCTTTGGCAGGCGCAATAGGAAGTTCTTGTGGTGGGAATTCAACAGTACTGTTAAAAAAGCCTTATTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCAAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACTAGTAACTGGCTAGAAGTGATTTTCAGTATATGCATCGTACTCAGTGGACTGTTGCTTTTCACATTATTGATTGGTAACATTCAGGTATTCTTACATGCTGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGAGACATGGAGTGGTGGATGAGGAGGAGGCAGTTGCCATCACGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCTGCGATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCTGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTCGACCTCATTAAAAAGGTTCCTTTGTTCCACAACTTAGATGACCTTATTCTTGACAACATCTGTGACAGGGTGAGGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGATGTTCATCGTCCGAGGACGCATAAAGCGGAGCCAAAGTCTGAGCAAAGGCATGGTAGCCTTAAGCATCCTTGAGCCAGGAGGGTTTTTGGGTGACGAGCTACTTTCATGGTGCCTTCGCCGGCCATTTATAGATAGACTTCCGGCCTCCTCAGCCACATTTGTGTGTCTTGAATCAGCAGAAGCCTTTGGCCTTGATGCAGAGCACTTGAGGTACATCACTGATCACTTCAGGTACAAGTTTGCCAACGAGAGGCTGAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACCTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACGCCTGTAAGGGAGATTGGAGGGACTGAGCGCAGGCTCCTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCATCTTGAATGA 2130 0.4981 MPNTFSLLWWIGKKLRRRNTVSNGESGSNENVVGAVVVDDNPFGSTVECYACTQVGVPVFHSTSCDSFNQPQWEASAGSSLVPIQNRPNKVLGFRTVSGSNIGPFGRVLDPRSKRVQKWNRALLLARGVALAIDPLFFYSLSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDAREIASHYLRSLKGFWFDAFVILPVPQAVFWLVVPKLIREERIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEVCYQSLAGAIGSSCGGNSTVLLKKPYCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIKKVPLFHNLDDLILDNICDRVRPLVFSKDEKIIREGDPVPRMMFIVRGRIKRSQSLSKGMVALSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDAEHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVREIGGTERRLLQYAAMFMSIRPHDHLE* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00496 709 SUPERFAMILY Voltage-gated potassium channels 110 443 - -
Phac8g00496 709 CDD CAP_ED 522 632 IPR000595 -
Phac8g00496 709 SUPERFAMILY cAMP-binding domain-like 449 636 IPR018490 -
Phac8g00496 709 Gene3D - 150 445 - -
Phac8g00496 709 Gene3D Jelly Rolls 520 638 IPR014710 -
Phac8g00496 709 SMART cnmp_10 522 648 IPR000595 -
Phac8g00496 709 Gene3D Helix hairpin bin 448 513 - -
Phac8g00496 709 Pfam Ion transport protein 119 440 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phac8g00496 709 ProSiteProfiles cAMP/cGMP binding motif profile. 522 632 IPR000595 -
Phac8g00496 709 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 97 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00496 Phac-Chr8 3100687 3107800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00496 8 709 Ion Channels AT5G15410 76.422 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00496 K05391 - gmx:100798823 1298.11