Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00469 ATGGAGCAAAGACAGATCTTTGCTCATGTGGTCATTTGGGTTCTAATGGTCCTTGTTGGAGCCTCTTGTGCTAAAGCAGGAGAAGGAGAAGCAGCTGATAGGATTTTGGCACTCCCTGGTCAGCCTAAGGTGTCATTTCAGCAGTTCTCTGGCTATGTTACTGTCAACAAGGTTGCTGGTAGAGCTCTCTTTTACTGGCTCACTGAAGCTGCACAAAATCCTCTCACCAAACCTTTGGTCATTTGGCTCAATGGAGGTCCAGGATGTTCATCAGTGGCATATGGAGCGTCTGAAGAGATTGGACCATTCAGAATAAACAAAACAGCTTCTGGGCTATACATTAACAAGTTTTCATGGAACACTGTGGCCAACCTCTTGTTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTACACCAACCGCTCCTCCGACCTCCTCGACACCGGCGACCACCGCACCGCCCAAGACTCTCTGGAATTTGTTCTACAATGGCTAGAACGGTTCCCCCGTTACAAAAACCGGGAACTTTATATCACTGGAGAGAGCTATGCAGGACATTATGTACCTCAATTAGCTAAGGAAATCATGAACTATAACGCAAAAAGCAAGCACCCCATCAATCTGAAAGGCATAATGGTAGGAAATGCAGTGACAGACAACTACTATGATAACTTGGGGACAGTGACATATTGGTGGAGCCATGCTATGATCTCGGACCAGACTTACCGGCAACTGATGAGTACATGTGATTTTCACCGGCAGAAGGAATCTGATGAGTGTGAATCAGTGTATAGCTATGCCATGGATCAAGAATTCGGTAACATTGATCAGTACAACATCTATGCTCCTCCATGCAACAACTCTGATGGTAGTACCTCTCCCACCCGCCACACCATGCACTTACCTCACCGACCCCATAAGGCTTTTAGGCATTGGTCTGGTTATGATCCATGTACAGAAAAGTATGCAGAGATTTACTACAACAGGCCAGATGTTCAGAAAGCACTCCACGCTAACACAACTAGAATCCCTTATAGGTGGACTGCTTGCAGTGAGGTTTTGAATCGAAACTGGAATGACACAGATGTATCCGTTCTTCCCATTTATAGAGAGTTGATAGCTCACGGAATACGAGTTTGGGTGTTCAGTGGGGACGTGGACTCAGTGGTGCCTGTCACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGTCAACTAAAATACCATGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGGTGGACAGAGGTGTACGAAGGAGTAACATTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCTCTGTTCAAGCCAAGAGCAGCCCTTCAGTTATTCACATCATTCCTTGCAGGAAAGCCTCTACCAAAGTCCTAA 1398 0.4664 MEQRQIFAHVVIWVLMVLVGASCAKAGEGEAADRILALPGQPKVSFQQFSGYVTVNKVAGRALFYWLTEAAQNPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYINKFSWNTVANLLFLEAPAGVGFSYTNRSSDLLDTGDHRTAQDSLEFVLQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMNYNAKSKHPINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESVYSYAMDQEFGNIDQYNIYAPPCNNSDGSTSPTRHTMHLPHRPHKAFRHWSGYDPCTEKYAEIYYNRPDVQKALHANTTRIPYRWTACSEVLNRNWNDTDVSVLPIYRELIAHGIRVWVFSGDVDSVVPVTATRYALAQLKLSTKIPWYPWYVKNQVGGWTEVYEGVTFATVRGAGHEVPLFKPRAALQLFTSFLAGKPLPKS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00469 465 SUPERFAMILY alpha/beta-Hydrolases 31 463 IPR029058 -
Phac8g00469 465 Gene3D - 318 355 - -
Phac8g00469 465 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Phac8g00469 465 Gene3D - 365 459 - -
Phac8g00469 465 FunFam Carboxypeptidase 29 287 - -
Phac8g00469 465 Pfam Serine carboxypeptidase 40 458 IPR001563 GO:0004185|GO:0006508
Phac8g00469 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Phac8g00469 465 FunFam Carboxypeptidase 365 459 - -
Phac8g00469 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Phac8g00469 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Phac8g00469 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Phac8g00469 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Phac8g00469 465 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Phac8g00469 465 Gene3D alpha/beta hydrolase 29 287 IPR029058 -
Phac8g00469 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 446 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00469 Phac-Chr8 2857263 2863772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00469 323 462 Calmodulin-binding Proteins AT2G22960 30.496 2.12e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00469 K16297 - gmx:100807680 904.82