Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00459 ATGGGTGGAACAAAGCAACAGGAAGCCATGAAAGTGGTAGAAGTTTCAAGTATAGCACCAAGCTCTGAATCACAAGAGTTACCAACTGAGGCATCTTTTGCCCTCACCTTCTTTGACATCTTATGGCTAAGGTTACCCCCTGTTCAACGTGTCTTCTTCTATCAATTTGATCATCCAAGTAATGTCTTTTATGATACCCTTCTTCCCAAACTCAAACACTCTCTCTCTCTCGCACTTGGTCACTTTTTCCCTCTTGCTGGGCACCTCACTTGGCCCACTCACTCCACCAAACCCACCATCGTTTACAACCAGGGTGATACTCTTTCACTCACTGTAGCTGAATCGGAGGCTGATTTCAACCATCTAGCAGGCACAGGTCTCTCTGAAGCTACAGAGACTCACCATCTTGTACCTCCCTTGACCATATCCCACGAGCAAACTACGCTTTTTGCCTTGCAAGTCACTCTCTTTCCAAACTCTGGATTTTCCATTGGAGTAACCTCCCACCATGCTGTTCTTGATGGCAAAGCTTCAACAACATTTTTCAAATCCTGGGCATATCTTTGCAGAGAATCACAACCACCCTTCTCTTTGCCACCTGAATGGAGTCCTGTTTTTGACAGGGAAATAGTGAAAGACCCTACTAATATCGGAGAAAAGTTTTCCCGGGATTGGTTGAGGCTAGGTGGGCCCAACAACAGAAGCCTCATGGTTAATGACATGCCAGTTCCAGAAGGTGCAACTAGAGGCTTGTTTCAGTTGTCTCGCTCAGATATTGAAAAGCTGAGGCAGATTGTGGAGAGGAAAGAGAATAACACCAATCTTCACTTGTCAACGTTTGTGTTAGCTGCCGCTTATGCGATGGTTTGCAGAGTGAAAGCAGAAGGAGCCGAAAGTCAAAAAATTGGTTTCGGTCTAAATATTGATTGCAGGAGTCAGTTGGAGCCGCCTGTTCCTCCAACATATTTAGGGAACTGTGTTGGTATCGCTGTTCCAGTTACTGAAACAAGTGAAATTATGGGGGAGGATGGACTTGTTGTGGCTGTGAAAGCACTGAGTGAAACTTTGGGAAATTTGAAGAAGGTTGGTTTTCTGAGTAAAGCAGAAAACTGGTGGAAGATGGTCTATGAAAGTTACGAAATGGGTGACACAAAGACAGCTGCCTTTGCAGGGTCACCGAGGTTTGAGGTTTACAGTTGTGACTTCGGTTGGGGAAAACCAACGAAGGTGGAGATGGTGTCTATTGACAGAACTGCAGCGTTTTGTTTTTCAGATAGCAGAACTGGTGATGGAATTGAAATAGGTTTTGTGACCAAGAAAAAAGCTATGGAGACCTTTACTTCTCTCTTTGTCGATGGCCTTCAATCTTGA 1371 0.4471 MGGTKQQEAMKVVEVSSIAPSSESQELPTEASFALTFFDILWLRLPPVQRVFFYQFDHPSNVFYDTLLPKLKHSLSLALGHFFPLAGHLTWPTHSTKPTIVYNQGDTLSLTVAESEADFNHLAGTGLSEATETHHLVPPLTISHEQTTLFALQVTLFPNSGFSIGVTSHHAVLDGKASTTFFKSWAYLCRESQPPFSLPPEWSPVFDREIVKDPTNIGEKFSRDWLRLGGPNNRSLMVNDMPVPEGATRGLFQLSRSDIEKLRQIVERKENNTNLHLSTFVLAAAYAMVCRVKAEGAESQKIGFGLNIDCRSQLEPPVPPTYLGNCVGIAVPVTETSEIMGEDGLVVAVKALSETLGNLKKVGFLSKAENWWKMVYESYEMGDTKTAAFAGSPRFEVYSCDFGWGKPTKVEMVSIDRTAAFCFSDSRTGDGIEIGFVTKKKAMETFTSLFVDGLQS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00459 456 SUPERFAMILY CoA-dependent acyltransferases 249 456 - -
Phac8g00459 456 Gene3D - 9 235 IPR023213 -
Phac8g00459 456 Gene3D - 244 456 IPR023213 -
Phac8g00459 456 PANTHER - 10 455 - -
Phac8g00459 456 Pfam Transferase family 17 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00459 Phac-Chr8 2719933 2722284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00459 51 446 Monolignol Biosynthesis Gene Families AT5G48930 24.598 1.42e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00459 - - gmx:100805184 627.476