Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00457 ATGGTACCCTGGAACAGAATTTTGACAAGCATAAAGTGGAAGGACAAAACTCTGCACCTAGCTACGAACAATGAGATACATAAAATCATGATTAAGAGCCCAAAAGAAGCGGATTTTCCTTTAAAACTGGAGGGTAGTCATTCTCAAACAATTAGTGATCCTGAAAAGGCAAAGGCTTCATCAAGCTCAGCAGCACAATGGCCAAGATTGAAGGATCCAAGGATTGTTCGAGTATCTAGAGCCTTTGGAGGAAAAGACAGGCATAGCAAGGTTTGCACAATAAGAGGGTTAAGAGACAGAAGAGTGAGATTATCAGTACCAACTGCAATCCAACTCTATGATCTTCAAGATAGGTTAGGGCTCAGTCAACCCAGCAAGGTTGTTGACTGGTTGCTCAATGCAGCTAAGCATGAAATTGATGAACTTCCACCACTGCCAATTGTTCCTTCAGTGAATAACTTCACCCTTGGTTATCCATCTGCTGTTACTTCTAATGAAGCTACAACCCCTCACTCTCAGCCTAATCAACAACTTCTTAATATAAATAGTAGCATTCAGTGGCAAGGTTCAAACCAAAATTCTTCATGGAAATTAAAGCGTAAAGAAATTTCAGGAGAAATGATCAGCATTGACAAAGCAAATTGGATAAATAGAAGTGAAGAGGATAAGCAAGGAAGCAATAGTGAAGGTCCTAGCACACATGTTATGCCAAATAATCTCTTACCAAGGGTAAACCATCCTTCATTCTTGGGCCTGCTAAATACCATGCCACATGGTTACCAGTGGGAACCTTCCGCTGGTGATGTTTCTCATCAGTTGCCAAACAATGGATTTTCAAACCAAACAGACATACACAGCATTAGCGTTGTACCTTTCCCGACATCAACACTGTCTTTATCATCAGGGAATTCTCAAATTCTGTTATGTCCTCCAGGAGCAGCACAGTCATATTTCCCTTCACATTTTACAGCAATGGACATGGATCAGAGGCAAATCAACCACTATCAGATGTTGAGTTCAGGTCCTCAAAACCCATCGCCGAATTCTCTCAACCATTCTTTTAGCTTGGCTATGATGTCTCATAAACCTCTCCACTCACCCAACTGCAGCAAAAGCCCATCCCACAAAGACCAAGATTTCCCTTCCAAGTGA 1152 0.4158 MVPWNRILTSIKWKDKTLHLATNNEIHKIMIKSPKEADFPLKLEGSHSQTISDPEKAKASSSSAAQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPIVPSVNNFTLGYPSAVTSNEATTPHSQPNQQLLNINSSIQWQGSNQNSSWKLKRKEISGEMISIDKANWINRSEEDKQGSNSEGPSTHVMPNNLLPRVNHPSFLGLLNTMPHGYQWEPSAGDVSHQLPNNGFSNQTDIHSISVVPFPTSTLSLSSGNSQILLCPPGAAQSYFPSHFTAMDMDQRQINHYQMLSSGPQNPSPNSLNHSFSLAMMSHKPLHSPNCSKSPSHKDQDFPSK* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00457 383 ProSiteProfiles TCP domain profile. 84 142 IPR017887 -
Phac8g00457 383 Pfam TCP family transcription factor 84 205 IPR017887 -
Phac8g00457 383 MobiDBLite consensus disorder prediction 361 383 - -
Phac8g00457 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 54 352 IPR005333 GO:0003700
Phac8g00457 383 MobiDBLite consensus disorder prediction 214 241 - -
Phac8g00457 383 MobiDBLite consensus disorder prediction 45 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00457 Phac-Chr8 2701077 2703323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00457 67 337 TCP Transcription Factor Family AT3G02150 41.958 5.02e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac8g00457 TCP 2.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00457 - - var:108327895 707.212