Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00434 ATGAACGGTATCGTCTCAGATAAAACCGATGTTTACTCATTTGGTGTGGTTCTATTACAAGTTGTGTGTGGAAAGAACTATTTTTTCGTGAGAGAAATAGATGAATCTATGGAGAAGTCTGTTGAGGAGAGAATTGATTTGGATATTGAAGGAAAGATTGCGCCAGAGTGTTGGAAAGTATTTATAGATATCCTCCAAAGATGTGTGGATTATGAAGCAGAAGAGCGACCAACAATGGGTGAAGTGGAGGTGCAACTTCAGTATGCTCTGTCATTGCAAGAACAAGCAGATATCACAAACATCCATGATGATTATATCTTATTGTCAAAAACCATTATTAACCTACATCTTAACATAAAAGAGCAATAA 369 0.3631 MNGIVSDKTDVYSFGVVLLQVVCGKNYFFVREIDESMEKSVEERIDLDIEGKIAPECWKVFIDILQRCVDYEAEERPTMGEVEVQLQYALSLQEQADITNIHDDYILLSKTIINLHLNIKEQ* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00434 122 PANTHER OS07G0166700 PROTEIN 3 93 IPR045272 GO:0004714|GO:0006468
Phac8g00434 122 Pfam Protein tyrosine and serine/threonine kinase 3 85 IPR001245 GO:0004672|GO:0006468
Phac8g00434 122 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Phac8g00434 122 SUPERFAMILY Protein kinase-like (PK-like) 2 87 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00434 Phac-Chr8 2573306 2573674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00434 5 97 Receptor kinase-like Gene Family AT3G51550 36.538 7.03e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phac8g00434 PK_Tyr_Ser-Thr 2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00434 - - pvu:PHAVU_008G029700g 183.726