Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00428 ATGGCCCAGTCCTTCGGTCAGACCGAGATAAACTGGGACAAGCTAGATAAAACTAGGTTCTATGTCGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTACCCCATTTCGGTTGTGAAAACTAGGCTGCAGGTTGCTACAAAGGATGCTGTAGAGAGAAATGTGTTTTCTGTTGTGAAAGGAATACTTAAAACAGATGGCGTCCCTGGCCTGTATAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCCAGAATAATATTCCTCTCCACTCTAGAGACCACAAAGGTGGCTGCCTTCAGAATGCTTGAACCGTTTAGACTATCTGAAACTACCCAAGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCGATTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGCGGGGGTTTGGATGTTGCTCGCAAGGTTTTAAGATCTGATGGCATCCGGGGATTGTATAGAGGGTTTGGTCTGTCTGTTATTACTTATTCACCTGCTAGTGCAGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTACATTTGGAGATTCTTGGGCCATGATACCAAATATGATGAACACATTCCTAGTATGCAGAAAATAATGTTAGTTCAGGCTATGGGAGGGATTATTGCTGGTGCATCTTCATCTTGCATTACAACCCCATTGGATACTATCAAGACACGATTACAGGTTTGCATAGTTTCATTGAACGGGTTTATTTCTGTTTTTTAG 807 0.4387 MAQSFGQTEINWDKLDKTRFYVVGAGLFTGVSVALYPISVVKTRLQVATKDAVERNVFSVVKGILKTDGVPGLYRGFGTVITGAIPARIIFLSTLETTKVAAFRMLEPFRLSETTQAAIANGVAGMTSSIFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVITYSPASAVWWASYGSSQRYIWRFLGHDTKYDEHIPSMQKIMLVQAMGGIIAGASSSCITTPLDTIKTRLQVCIVSLNGFISVF* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00428 268 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Phac8g00428 268 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 3 257 - -
Phac8g00428 268 Gene3D Mitochondrial carrier domain 153 268 IPR023395 -
Phac8g00428 268 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
Phac8g00428 268 Pfam Mitochondrial carrier protein 227 256 IPR018108 -
Phac8g00428 268 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Phac8g00428 268 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Phac8g00428 268 SUPERFAMILY Mitochondrial carrier 13 260 IPR023395 -
Phac8g00428 268 Gene3D Mitochondrial carrier domain 11 152 IPR023395 -
Phac8g00428 268 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 268 IPR018108 -
Phac8g00428 268 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Phac8g00428 268 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Phac8g00428 268 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00428 Phac-Chr8 2525459 2530726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00428 10 256 Chloroplast and Mitochondria Gene Families AT5G15640 75.000 1.01e-134 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00428 K15121 - gmx:100781796 472.626