Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00411 ATGGTGGCTATGATGAGTTTCCTATCAACAGACAAAGGGTGGACGAAAGGCCCTTGGACTGGTGAAGAGGACAAGTTGCTAAGTGAATATGTTTGCTTGTATGGGGAGGGAAGGTGGAGTTCAGTGGCAAAGTTTACAGGATTAAACAGGAGCGGCAAAAGCTGTAGATTAAGATGGGTAAATTATTTGAAGCCTGGTCTCAAGAAAGGTCAATTAACACCTTTGGAAGAAGGAACCATAATGGAACTACATGCAATTTTGGGTAACAAGTGGTCTACAATAGCAAAGTACTTGCCAGGTAGAACAGATAACGAGATCAAGAACTACTGGAGAACCCACTTCGGGAAGAGGGAGAAATCCAAACACAAGAAGCTACAAAGGCGACAGAAGGAACAACAACCTAAGAAGTGTGATTTCAGAAGCATCATGTGCCACAAGGATACCATAAACGAAACAAAATCCTTTGAGACACAAAATAATAAGCTGCAAGAAATTGGTTTGATGTACCCAACAATAGATAACCAATATAATACCGTTCCTTCCATGCATGAGGGTTTCTCATCCACGTGGCCAGACACTCTAGTGGATGATGGCTTATGGTTTGGTTTATGGGACTTTGATGAACCACTGAGTTTTGCAGATTGTGTTAACCAGTTTAGCAAATGTGCCATGCCAAATGAAGTCACATGTTCTGTTGGAGGGGATTCCACGCAAAGTGATAATAAAACTTATTGTTTTGATGATACATATGGCAACCTCTTCTACGGAAAAGACATATTTGGATAA 786 0.4097 MVAMMSFLSTDKGWTKGPWTGEEDKLLSEYVCLYGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGQLTPLEEGTIMELHAILGNKWSTIAKYLPGRTDNEIKNYWRTHFGKREKSKHKKLQRRQKEQQPKKCDFRSIMCHKDTINETKSFETQNNKLQEIGLMYPTIDNQYNTVPSMHEGFSSTWPDTLVDDGLWFGLWDFDEPLSFADCVNQFSKCAMPNEVTCSVGGDSTQSDNKTYCFDDTYGNLFYGKDIFG* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00411 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Phac8g00411 261 CDD SANT 73 114 IPR001005 -
Phac8g00411 261 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Phac8g00411 261 FunFam Myb transcription factor 16 68 - -
Phac8g00411 261 SMART sant 15 65 IPR001005 -
Phac8g00411 261 SMART sant 68 116 IPR001005 -
Phac8g00411 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Phac8g00411 261 CDD SANT 18 63 IPR001005 -
Phac8g00411 261 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Phac8g00411 261 Gene3D - 15 68 - -
Phac8g00411 261 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 15 164 - -
Phac8g00411 261 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Phac8g00411 261 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Phac8g00411 261 Gene3D - 71 142 - -
Phac8g00411 261 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00411 Phac-Chr8 2431076 2432957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00411 13 218 MYB Transcription Factor Family AT3G30210 50.926 3.55e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g00411 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00411 K09422 - gmx:100785540 400.593