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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Phac8g00406
ATGGGAAGGGGTAGGGTTCAGCTCAAGCGGATCGAGAACAAAACAAGCCAGCAAGTCACGTTCTCCAAGAGGAGAACGGGACTTCTCAAGAAAGCTCACGAAATCTCTGTGCTCTGCGATGCTCAAGTCGCTTTGATTATGTTCTCTACCAAAGGCAAACTTTTTGAGTATTCCTCTGAACGCAGCATGGAAGACGTCTTGGAACGTTACGAGAGATATACTCATACAGCACTTAATGGAACCAACAATGATTCGGAGGGCAATTGGTCTTTCGAATATATCAAGCTCAACGCTAAAGTTGAAGTGTTGGAGAGGAACGTAAGGAATTTCTTGGGAAATGAGCTTGATCCCTTGAATTTGAAAGAGCTTCAGAGTTTGGAGCAGCAGCTTGACACATCTCTGAAGCGCATCCGAACAAGAAAGAATCAAGTTATGAATCAATCTATCTCAGAGCTGCATAAAAGGGCACGGACATTACAAGAGCAAAACAGCAAGCTAACAAAGATGAAGGAGAAAGAGAAGACATTGACTGAACGTCCACAGAGCGTACCAGAAACTCTTGGCCAAAATTCAACCAACCTCAACTTATGTTCTCCTCAACTATTACCATCACAAAGACTTTTAACTCTCAGTGGGACATTGCAAGGAAGAACAAGGGTGGAGGAAAGGGGAGAAGCTCAAACAGTGCCAACTGCCAATTCACTCATTCCACCATGGATGCTGCACATCTGA
732
0.4413
MGRGRVQLKRIENKTSQQVTFSKRRTGLLKKAHEISVLCDAQVALIMFSTKGKLFEYSSERSMEDVLERYERYTHTALNGTNNDSEGNWSFEYIKLNAKVEVLERNVRNFLGNELDPLNLKELQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARTLQEQNSKLTKMKEKEKTLTERPQSVPETLGQNSTNLNLCSPQLLPSQRLLTLSGTLQGRTRVEERGEAQTVPTANSLIPPWMLHI*
244
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Phac8g00406
243
PRINTS
MADS domain signature
3
23
IPR002100
GO:0003677|GO:0046983
Phac8g00406
243
PRINTS
MADS domain signature
38
59
IPR002100
GO:0003677|GO:0046983
Phac8g00406
243
PRINTS
MADS domain signature
23
38
IPR002100
GO:0003677|GO:0046983
Phac8g00406
243
ProSiteProfiles
MADS-box domain profile.
1
61
IPR002100
GO:0003677|GO:0046983
Phac8g00406
243
Coils
Coil
123
179
-
-
Phac8g00406
243
MobiDBLite
consensus disorder prediction
167
192
-
-
Phac8g00406
243
ProSiteProfiles
K-box domain profile.
86
176
IPR002487
GO:0003700|GO:0005634|GO:0006355
Phac8g00406
243
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
10
57
IPR002100
GO:0003677|GO:0046983
Phac8g00406
243
Gene3D
-
13
84
IPR036879
GO:0003677|GO:0046983
Phac8g00406
243
FunFam
MADS-box transcription factor MADS-MC
13
86
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Phac8g00406
Phac-Chr8
2401420
2409959
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Phac8g00406
1
176
MADS-box Gene Family
AT1G26310
63.536
3.32e-75
227
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-MIKC
Phac8g00406
K-box
6.7e-26
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Phac8g00406
K09264
-
gmx:100786580
363.999
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