Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00390 ATGACTTCTACAGCATCACTTGATAGTTCTCTATCTGACATTTACCGTTCTCCTCCGAGGCCATTGCCATATGATGCAGACCCCAGGTTTTTCCGTTCACAGCGCGATGGACTAGTGTCAAGACGTGAGAAGGGTTCAAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGATGGAGATGCTGACTCAGAATCTTTAAATTTGGGTGGCAAATGGAATGATACCAGTGAAGATGGATCAAAGGAATACCGTAAGTCCTCTGTGAGACTTTCATCAGCAAAACTTACAACTGGAGCTGGGGTTGTGTATTCATCATCAGAAGAGGAGGATGTCTGTCCGACTTGTCTAGAAGAATACACTGAAGAAAATCCAAAGATAGTGACAAAATGCTCTCATCATTTTCACCTTGGTTGCATATATGAGTGGATGGAAAGAAGTGACAACTGTCCTGTTTGTGGGAAGGTGATGGTATTCGATGAAACGACTTAA 492 0.4268 MTSTASLDSSLSDIYRSPPRPLPYDADPRFFRSQRDGLVSRREKGSSHLNEESEPLRGDGDADSESLNLGGKWNDTSEDGSKEYRKSSVRLSSAKLTTGAGVVYSSSEEEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETT* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00390 163 MobiDBLite consensus disorder prediction 1 90 - -
Phac8g00390 163 Pfam RING-H2 zinc finger domain 107 153 IPR024766 GO:0008270
Phac8g00390 163 MobiDBLite consensus disorder prediction 29 61 - -
Phac8g00390 163 ProSiteProfiles Zinc finger RING-type profile. 113 153 IPR001841 -
Phac8g00390 163 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 4 161 - -
Phac8g00390 163 FunFam E3 ubiquitin-protein ligase At3g02290-like 90 160 - -
Phac8g00390 163 SUPERFAMILY RING/U-box 108 160 - -
Phac8g00390 163 SMART ring_2 113 153 IPR001841 -
Phac8g00390 163 CDD RING-H2_AIRP1-like 109 157 - -
Phac8g00390 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 90 160 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00390 Phac-Chr8 2359717 2364701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00390 1 162 C3H Transcription Factor Family AT5G15790 61.310 2.23e-70 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00390 - - gmx:100788192 319.316