Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00309 ATGTTCCCTTCCTCTAACTACACCTCAGGCTCTTACCCTCGTTTCCCTTCTTCTTCGTCTTCTTCTACTTCGCCGTACCCTTCTTTCACTTTCCTTCACCCTGAAAATTCTTCTACCAGCACCTTTCTCCATGATCCACTTTCTGTTACCTTCATACCAACCAACTACCATGCTCCAATCCCTGAAACGCTAGCCAATTGGGCAGTTGCGGATTATGCGGCTGCGGCAATGCTGAATCAGGATCTCGGCGGCGCTCTTTACGGCATCACCAAAAAACCGGCGAAGAAAACGACGAAGAAAGACAGGCACAGCAAGATTCACACATCTCAGGGCTTGAGGGACCGGAGGGTGAGGCTGTCGATTGAGATCGCACGCAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGATAAAGCCAGCAACACCCTTGACTGGCTCTTCACGAAGTCCAAGAAGGCAATTAAGGAGCTAACTCGCAGCAAGCACAGCGTTGATAGCTTCGAATTCTCCTCATCTTCGGATGGTGAAGTGGTTTCTGTGATCCACCAAGACAAAGAACAACATCAAGGGGTGGACTTGGAAGAGGGGAAGTTGAAGGAACCTGTTTATTGTGTTAAAGCAAAGATGAAGGAATCAAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTTGCAAAGGGAAGGTGCAAGAGTTCAACAAAAACTGCCCTGCAACTGAAAACCATCAAATCCTTAACCAATCAAGGAGTGATGAAACCTTTATACAAGATATGGAAGGAGGAATGTCGAGAGACGATGACTTCAACGTTATTGAAGAATCCATTGTCATCAAGAGAAAGTTGAAACACTCTCTGATGTCTTCTTCCATTCATCACCAGAACGCTGTGATCCCTAAGGAAGCAAGTGTGAACAACAGTGACTACCACTCCTTCCCCAATTTGTCGCCAAATTGGGAAGCTAATGGTGCTGCCAATGGACGCTCCACCTTTTGTGCAATAGCCAGCATGAATCTATCTGCAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCTACCTAA 1080 0.4639 MFPSSNYTSGSYPRFPSSSSSSTSPYPSFTFLHPENSSTSTFLHDPLSVTFIPTNYHAPIPETLANWAVADYAAAAMLNQDLGGALYGITKKPAKKTTKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRSKHSVDSFEFSSSSDGEVVSVIHQDKEQHQGVDLEEGKLKEPVYCVKAKMKESREKARARARERTSCKGKVQEFNKNCPATENHQILNQSRSDETFIQDMEGGMSRDDDFNVIEESIVIKRKLKHSLMSSSIHHQNAVIPKEASVNNSDYHSFPNLSPNWEANGAANGRSTFCAIASMNLSAGLQIFGKSWEECTNPHPT* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00309 359 MobiDBLite consensus disorder prediction 1 21 - -
Phac8g00309 359 Pfam TCP family transcription factor 97 227 IPR017887 -
Phac8g00309 359 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 91 321 IPR005333 GO:0003700
Phac8g00309 359 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Phac8g00309 359 ProSiteProfiles R domain profile. 210 227 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00309 Phac-Chr8 1849616 1852205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00309 42 224 TCP Transcription Factor Family AT1G67260 39.409 7.60e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac8g00309 TCP 5.7e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00309 - - gmx:100792572 523.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00309 8 1849616 1852205 Phac3g02705 3 29491222 29493633 ECH
Phac8g00309 8 1849616 1852205 Phac8g00309 8 1849616 1852205 ECH