Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00301 ATGTCTGCAATGGTTTCAGCTCTTGCTCAAGTTATGGGAACTTCCAATCACAACCCTCCCATGCCACAATCAACCTCTTTTCCTCTCCCAGATCAACCTCAACCTCCTCCAGATCAAGGGGTGAGAAAGAAGGCACACTACAGAGGAGTGAGGCAGAGACCATGGGGGAAATGGGCAGCAGAAATCCGTGACCCAAAGAAAGCAGCCAGAGTGTGGTTAGGAACCTTTGAAACAGCAGAGGATGCAGCCCTTGCTTATGACAGAGCAGCCCTAAAGTTCAAGGGCACAAAAGCAAAGCTCAATTTCCCTGAAAGAGTTCATCATAATGTTCCTTATATGCAGCAACAACACCACCAACCTTCATCAAACACAAACACTTTTCCCTTCCATGCAACTTCCAACACTGCCACTGCTCCCACTCACTCTTTTTCTTCTGTTCCTGTTCTTGCTCCACCCTCATCTTCCACACATGATCATGATCAACATGGCCACCAACTTTTTCCAAACCTGCTTCAATATGCACAGATTCTTTCAAGTGACGATGCAGAGTTTCCTTACTACACATCTCATCTTTTCAACCAACAACAACATCAGCAGCAGCAGCAAGAACAACAACCTTTCACCTCTCAATTCTCTACCACTTTTTCTTCAACCTCTTCTCAAGCATCCTACTTCTACAACCACCAACAACAATTTGATGAACAGGGTCATGATCACTCAGGCCAATAG 729 0.454 MSAMVSALAQVMGTSNHNPPMPQSTSFPLPDQPQPPPDQGVRKKAHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDRAALKFKGTKAKLNFPERVHHNVPYMQQQHHQPSSNTNTFPFHATSNTATAPTHSFSSVPVLAPPSSSTHDHDQHGHQLFPNLLQYAQILSSDDAEFPYYTSHLFNQQQHQQQQQEQQPFTSQFSTTFSSTSSQASYFYNHQQQFDEQGHDHSGQ* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00301 242 FunFam Ethylene-responsive transcription factor 2 45 104 - -
Phac8g00301 242 Gene3D AP2/ERF domain 45 105 IPR036955 GO:0003700|GO:0006355
Phac8g00301 242 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Phac8g00301 242 PANTHER DNA-BINDING DOMAIN 34 203 IPR044808 GO:0003700|GO:0009873
Phac8g00301 242 MobiDBLite consensus disorder prediction 114 163 - -
Phac8g00301 242 MobiDBLite consensus disorder prediction 114 156 - -
Phac8g00301 242 MobiDBLite consensus disorder prediction 23 37 - -
Phac8g00301 242 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Phac8g00301 242 MobiDBLite consensus disorder prediction 193 213 - -
Phac8g00301 242 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Phac8g00301 242 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Phac8g00301 242 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Phac8g00301 242 MobiDBLite consensus disorder prediction 13 42 - -
Phac8g00301 242 CDD AP2 45 104 IPR001471 GO:0003700|GO:0006355
Phac8g00301 242 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00301 Phac-Chr8 1773524 1778556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00301 4 192 AP2-EREBP Transcription Factor Family AT5G13330 50.259 2.35e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g00301 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00301 - - vun:114185501 335.88