Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00294 ATGGAGGAAAGTGCTGAATCTTTAAGAGAGAGAAGTTTAAAATTTTACAAAGGATGTAGAAAATACACTGAAGGACTCGGGGAGGCCTATGATGGAGACATTGCATTTGCCAGTGCCCTAGAAACTTTTGGTGGTGGACATAATGACCCAATCAGTGTGGCTTTTGGAGGCCCTGTTATGACCAAATTCACCATAGCCCTAAGGGAAATTGGGACATACAAGGAAGTTCTTCGATCACAGGTTGAGCATATGCTAAATGACAGGTTGCTTCAGTTTGTCAATATTGATTTGCAAGAGGTCAAGGAAGCACGGAAACGCTTTGACAAGGCTAGCCTTATCTATGACCAGACTCGGGAGAGGTTTCTGTCACTAAGAAAAGGCACAAAAACTGATGTAGCTACTGCACTCGAAGAGGAGCTTCATAGTGCAAGATCTACATTTGAGCAAGCTCGGTTTAATCTGGTTACTGCCTTGTCAACTGTTGAAGCAAAGAAGAGATTTGAATTTTTGGAAGCAGTCAGTGGGACCATGGATGCTCATCTTCGTTACTTCAAACAGGGGTATGAGTTGTTGCACCAAATGGAGCCATATATTAACCAGGTCTTGACTTATGCTCAGCAATCAAGAGAAAGGTCCAATTATGAGCAGGCAGCCCTGAATGAAAGAATGCAAGAGTACAAACGACAGATTGATCGGGAGAGTAGGTGGGCATCAAATGGTTCTAATGGGTCTCCTAATGGAGATGGTATACAAGCCATTGGTAGAAGTTCACATAAGATGATAGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACAATTCGACAAGGTTATCTCTCTAAGCGTTCCTCAAACTTAAGGGGTGACTGGAAAAGGAGATTTTTTGTTCTTGATAGTCGGGGAATGCTGTATTACTACCGTAAGCAGTGCAGCAAATCATCTGGGTCGAGTAGTCAACATTCTGGCCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTTTTAAGTCGATGGCTGTCTTCTCATCACCATGGTGGAGTACATGATGAAAAATCTGTTGCTCATCACACTGTGAACCTGCTTACATCAACAATCAAAGTAGATGCTGACCAATCAGATTTGAGGTTTTGCTTCCGGATCATTTCACCCACAAAGAACTACACTTTGCAGGCAGAGAGTGCACTGGACCAAATGGATTGGATTGAAAAAATCACTGGTGTTATTGCCTCATTACTGAGTTCTCAGATTCCTGAAAGGATGTTGCCTGCAAGCCCAATGGGAAGTGGTCATCATAGGTCTACCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGATCACTCTGCTATTGAAGAATGTGCAGCAGACAGAAGTCTTGCTTCTGCACATCTGGAGCGCCCCTCAAGAAGTTTGCAACAGCAGCGATCCTGCACTAAAAGTGAGAAGCCAATTGATGTGCTGCGAAGAGTTTGTGGGAATGATAAATGTGCTGATTGCGGTGCTCCTGAACCTGATTGGGCATCACTAAATCTTGGTGTTCTTGTTTGCATTGAGTGTTCTGGTGTGCACCGTAACCTCGGCGTGCACATATCAAAGGTCAGGTCTCTTACTTTAGATGTTAAAGTGTGGGAACCTTCTGTGATAAGTTTATTTCAGTCTCTTGGGAATACTTTTGCCAACTCAGTCTGGGAGGAATTATTACAATCAAGAAGTGCCATTCAGGTTGATCTTGTCCCTACAGGCTTAAGCAAGTCTGATAAACCGCCGATGTTCTTCTTCCCCAAACCTTGTCAATCTGATTCTCTATCAGTGAAGGAAAAGTTCATCCATGCAAAGTATGCAGAGAAGCTTTTCGTTCGCAAGCCCAAGGACAACCGTCTCTCCGTGGCACAACAAATCTGGGAGGCTGTTCATGCTAATGACAAAAAAGCTGTATATCGATACATTGTTAATTCTGACGTTGATGTTAATGTTGCTTATGAGCAAATGTGCAACAGCTCCCTAACCCTTGCCAAAGTAATGCTATTACAAGAGCAGACTAGCCATGATCACAGCTCTACTTTGGCAGGGAACACATTGGACTGGTCCTCTAGTAAAGAAGGCCAGGTCATGGACAATCTAGATGGGTGCACCCTTCTTCACCTTGCATGTGAAACTGCAGATATTGGCATGGTGGAGCTCCTCCTACAGTATGGTGCAAATGTTAATGCCTCTGATTCAAGAGGTCAAACGCCACTACATCGCTGTATTCTCAAAGGCAGATCTGCATTTGCAAGATTAATGCTTTCTAGAGGAGCAGATCCTCGAGCTGTGGATGAGCAGGGAAGAACCCCAATTGAACTTGCTGCAGAGTCAAATGCTGGTGAAAGAGAAGTCCATGCTCCATTAAATGACTCTAATGGATGA 2409 0.4367 MEESAESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALETFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQEVKEARKRFDKASLIYDQTRERFLSLRKGTKTDVATALEEELHSARSTFEQARFNLVTALSTVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWASNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSSGSSSQHSGQRNSSELGSGLLSRWLSSHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERMLPASPMGSGHHRSTSESSSFESSDFDHSAIEECAADRSLASAHLERPSRSLQQQRSCTKSEKPIDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNTFANSVWEELLQSRSAIQVDLVPTGLSKSDKPPMFFFPKPCQSDSLSVKEKFIHAKYAEKLFVRKPKDNRLSVAQQIWEAVHANDKKAVYRYIVNSDVDVNVAYEQMCNSSLTLAKVMLLQEQTSHDHSSTLAGNTLDWSSSKEGQVMDNLDGCTLLHLACETADIGMVELLLQYGANVNASDSRGQTPLHRCILKGRSAFARLMLSRGADPRAVDEQGRTPIELAAESNAGEREVHAPLNDSNG* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00294 802 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 464 628 - -
Phac8g00294 802 SUPERFAMILY BAR/IMD domain-like 2 297 IPR027267 -
Phac8g00294 802 CDD PH_ACAP 277 414 - -
Phac8g00294 802 CDD BAR_SFC_plant 1 197 IPR035670 -
Phac8g00294 802 ProSiteProfiles PH domain profile. 274 410 IPR001849 -
Phac8g00294 802 SMART PH_update 275 412 IPR001849 -
Phac8g00294 802 PRINTS HIV Rev interacting protein signature 494 513 IPR001164 GO:0005096
Phac8g00294 802 PRINTS HIV Rev interacting protein signature 513 530 IPR001164 GO:0005096
Phac8g00294 802 PRINTS HIV Rev interacting protein signature 536 557 IPR001164 GO:0005096
Phac8g00294 802 ProSiteProfiles Ankyrin repeat region circular profile. 742 774 - -
Phac8g00294 802 SMART ANK_2a 742 771 IPR002110 GO:0005515
Phac8g00294 802 SMART ANK_2a 709 738 IPR002110 GO:0005515
Phac8g00294 802 MobiDBLite consensus disorder prediction 420 443 - -
Phac8g00294 802 Pfam Ankyrin repeats (many copies) 712 762 IPR002110 GO:0005515
Phac8g00294 802 ProSiteProfiles BAR domain profile. 1 207 IPR004148 GO:0005515|GO:0005737
Phac8g00294 802 SMART arf_gap_3 482 627 IPR001164 GO:0005096
Phac8g00294 802 SUPERFAMILY PH domain-like 275 426 - -
Phac8g00294 802 Gene3D Arf GTPase activating protein 462 624 IPR038508 -
Phac8g00294 802 Gene3D - 267 420 IPR011993 -
Phac8g00294 802 ProSiteProfiles Ankyrin repeat region circular profile. 709 740 - -
Phac8g00294 802 SUPERFAMILY Ankyrin repeat 643 787 IPR036770 -
Phac8g00294 802 ProSiteProfiles Ankyrin repeat profile. 709 741 IPR002110 GO:0005515
Phac8g00294 802 PANTHER CENTAURIN/ARF 1 798 IPR045258 GO:0005096
Phac8g00294 802 MobiDBLite consensus disorder prediction 230 252 - -
Phac8g00294 802 MobiDBLite consensus disorder prediction 768 802 - -
Phac8g00294 802 SMART 5bar 1 200 IPR004148 GO:0005515|GO:0005737
Phac8g00294 802 MobiDBLite consensus disorder prediction 429 443 - -
Phac8g00294 802 Pfam BAR domain of APPL family 2 214 IPR004148 GO:0005515|GO:0005737
Phac8g00294 802 ProSiteProfiles Ankyrin repeat profile. 742 774 IPR002110 GO:0005515
Phac8g00294 802 CDD ArfGap 485 614 - -
Phac8g00294 802 Gene3D - 625 794 IPR036770 -
Phac8g00294 802 Gene3D Arfaptin homology (AH) domain/BAR domain 1 233 IPR027267 -
Phac8g00294 802 MobiDBLite consensus disorder prediction 235 251 - -
Phac8g00294 802 Pfam PH domain 276 409 IPR001849 -
Phac8g00294 802 Pfam Putative GTPase activating protein for Arf 485 622 IPR001164 GO:0005096
Phac8g00294 802 SUPERFAMILY ArfGap/RecO-like zinc finger 482 622 IPR037278 -
Phac8g00294 802 ProSiteProfiles ARF GTPase-activating proteins domain profile. 482 627 IPR001164 GO:0005096
Phac8g00294 802 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00294 Phac-Chr8 1731616 1741360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00294 479 633 C2H2 Transcription Factor Family AT3G07940 40.252 3.95e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00294 K12489 - gmx:100789134 1468.37