Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00277 ATGACTCAGGCGGTGGAGGTGCTGAATAGGTATGGGACGGATATGGTGGGGGAGCCCAGGGGTTCTGATTCGGAGTGTTTGGCGGGTTTCGAGTGTTTTCTGAACATTGTGAGGGCACTGGGAATGGGATCGTGCATTTCGGAGGTTGGGGCTGGTGGTAGTTCCGATCCTCTTCTTTCTGATTCCAATACGGATGGGAAGAGGAGGAGGTTGAGGGGTTCCTCGTCCTTTGATTTCAGAGTGCCTGGGAGAATGTCCTCGAATGGGTCAAGCGAGGTTGCGTCCATGTTTTGTAAGCAAGGAAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGCTCCAAGGAAGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGACACAAAGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTCAATGCCCAGTGGGATTTGCATCATAAGAGTAGAGATGGACTCAGTGATCATAGCAGTGCCAACGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGAAGAGAAAACTAGCCCCATTGATCATGAACTTGATGAAACAGATATTACTTTTACATTGAGAGAATCTTTTCTGAAAGCTTGTAAGCTCATGGACAAAGAACTGAAAATGCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCTTGGTCAAGCAAGGGCTGGACCTTGTTATTGGAAATATTGGGGACTCAAGAGCTATATTGGGTACTAGAGATCACGATGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCAAATCTTCCAAGGGAGGAAGAGAGAATTAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGACTTTTGCCTGAAAGACTTCGGATTGATTGCAGTTCCAGATATCTCATATCACCACCTTACCGAGAAGGATGAGTTTGTTGTGTTGGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGGTCACTGGTTGAGTCAGCTGTTCAGGCATGGAGGGCAAAATATCCTTTTTGCAAGGTTGATGACTGTGCCGCGGTTTGCCTCTTCTTTGATTCAGATACAGATTTCAAGTCAAATGATACCAAAGGCAAGTTGGTATCGGAGGCATCTATTGACCAATCTGAGCATTTATCTTGA 1308 0.4503 MTQAVEVLNRYGTDMVGEPRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSSDPLLSDSNTDGKRRRLRGSSSFDFRVPGRMSSNGSSEVASMFCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHKVAKKVRDSFPLKLNAQWDLHHKSRDGLSDHSSANGSYKSEGNGFRLVEEKTSPIDHELDETDITFTLRESFLKACKLMDKELKMHPDIDCFCSGTTAVTLVKQGLDLVIGNIGDSRAILGTRDHDDSLIAVQLTIDLKPNLPREEERIRLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHHLTEKDEFVVLATDGIWDVLSNEEVVDIVASAPRSTAARSLVESAVQAWRAKYPFCKVDDCAAVCLFFDSDTDFKSNDTKGKLVSEASIDQSEHLS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00277 435 SMART PP2C_4 83 405 IPR001932 -
Phac8g00277 435 FunFam probable protein phosphatase 2C 33 88 410 - -
Phac8g00277 435 Pfam Protein phosphatase 2C 165 384 IPR001932 -
Phac8g00277 435 SUPERFAMILY PP2C-like 85 408 IPR036457 -
Phac8g00277 435 Gene3D - 84 409 IPR036457 -
Phac8g00277 435 CDD PP2Cc 93 407 IPR001932 -
Phac8g00277 435 ProSiteProfiles PPM-type phosphatase domain profile. 93 407 IPR001932 -
Phac8g00277 435 PANTHER PROTEIN PHOSPHATASE 83 405 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00277 Phac-Chr8 1608256 1613747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00277 61 408 PP2C-type Phosphatase Gene Family AT1G16220 59.551 2.07e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00277 - - vum:124830906 845.884