Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00259 ATGATGACTTCTTCAGCCCCATCAAGAGGAAGAAGAACAAGAATGACTATTTTTCAGAGAGTTCTGAGTTTGCTGATTTCAGTTTCATATTTGCTGACATGCTTAGGAAACAATGAGGTGCCTGCCCAGTTGAATGATGATGTTCTTGGCTTGATTGTGTTCAAATCAGACCTTCAAGACCCTTCTTCTCATCTTGCTTCGTGGAATGAAGACGATGTGAATCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGGATTATCTGGGAAGATTGGAAGAGGGCTTGAGAAGTTGCAGCATCTCACGGTATTGTCCCTTTCTCATAACAACTTGAGTGGGGGTATTAGTCCTTCTCTTACTCTTTCCAACACTCTTCAGAGGCTGAACCTTAGTCACAATGCTCTCTCTGGTTCAATTCCTACTTCTTTTGTGAATATGAATTCAATAAAGTTTCTTGATCTTTCAGAGAATTCATTCTCGGGATCAATCCCTGAGACTTTTTTTGACACTTGTTCTTCCCTTCATCACATTTCTCTGGCTAGGAACATGTTTGATGGGTCGGTTCCTGGCTCACTGTCTAGATGTTCCTCGTTGAACAACCTTAATCTTTCCAATAACCATTTATCTGGTAATGTGGACTTTAATGGGATTTGGTCACTGACCAGGCTTAGAACTTTGGATCTATCCAACAATGCCTTATCTGGGTCTTTACCTAGTGGAATTTCATCCATACATAACTTGAAGGAGATCTTATTACAAGGTAACCAGTTTTCAGGTCCTTTATCCACTGATATTGGATTCTGCATTCATCTAAGTAGGTTGGATTTTAGTGATAACCAGTTCAGTGGAGAACTACCTGATTCACTTGGAAGGCTTAGTTCTTTGAGCTATTTCAAGGCATCAAATAATTTTTTCACCAGCAAATTCCCTCCATGGATTGGTAACCTTACAAGTCTGGAGTTCCTAGAGCTTTCAAACAATCAGTTCACTGGAAGCATTCCAGAGTCAATAGGGGAACTGGGATCACTCTCTCATCTCAGCATTTCAAGCAACAAGCTTGTTGGAACTATTCCATCATCATTGAGTTCCTGCACAAAGTTATCTGTGATCCAGCTCAGAGGCAATGGTTTCAGTGGCACCATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATAGACTTGTCCCGAAATGAACTGAGTGGTTCAGTTCCAGCAGGATCGAGCAGGCTCTTGGAAACTCTAACCAACTTGGATCTTTCAGATAACCATCTCCAAGGGAATATCCCTGCAGAAACTGGTCTTCTTTCAAAACTAAGTTACTTGAATCTGTCTTGGAATGATCTTCAATCACAGATGCCTCCAGAGTTTGGTCTCCTTCAGAATCTAGCAGTTTTGGATATTCGCAACAGTGCCTTGCATGGTTCAGTTCCAGCAGATATATGCGACTCAGGCAATTTAGCTGTGCTCCAACTGGATGGAAATTCATTGCAAGGGACTATTCCAGAATGGATTGGGAATTGTAGCTCTCTTTACTTGCTGAGTTTGTCTCACAATAACTTGAGTGGTTCAATTCCAAAGTCCATGTCAAAGCTAAACAAGCTGAAAATCCTGAAACTGGAATCCAATGAGCTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAGTCTACTTGCTGTGAACATATCATACAACAGGCTCACAGGAAGGCTTCCCACAGGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTGGGTCTGTGCTCACCCTTGTTGGAGGGTCCTTGTAAAATGAATGTCCCCAAGCCACTAGTGCTTGACCCAAATGCCTACAACAACCAAATAAGCCCTCAAAGGCAGAGAAACGAATCATCAGAGTCTGGACCGGTCCACCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTGATTGTATTAGGAGTGATTGCTGTTAGCCTACTTAATGTTTCTGTGAGGAGAAAGCTCTCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGGAGTCCAGCCACAGGAAAGCTGATTCTGTTTGATTCCCAGTCCTCACCTGATTGGATCAGCAGTCCTGAGTCCTTGCTCAACAAGGCATCAGAGATTGGAGAAGGAGTGTTTGGAACCCTCTACAAGGTTCCATTGGGATCACAGGGTAGAATGGTAGCAATCAAGAAGCTTATATCCACCAACATAATCCAATATCCAGAAGACTTTGATAGGGAGGTTAGAATCCTAGGGAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGGTACTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTTTGCACCAAATGGTAGCTTGCAGGCCAAGCTACATGAGAGGCTTCCCTCAAGTCCACCTCTTTCGTGGCCTATAAGGTTCAAAATTTTGCTTGGAACAGCAAAGGGGCTTGCTCATTTGCACCATTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATTCTGCTTGACGAAAATTGCAACCCCAAGATCTCGGATTTCGGGTTAGCTCGGCTTCTGACAAAGCTGGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTGGCACCAGAATTAGCATGTCAGAGCCTAAGGGTGAATGAGAAATGTGATGTTTATGGTTTTGGGGTGATGATCCTTGAGCTGGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGACAATGTGCTTATACTGAATGACCATGTGAGGGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCACAGCATGAATGAGTACCCAGAAGATGAGGTATTACCTGTTCTAAAGCTAGCAATGGTATGCACCTCCCAAATTCCTTCAAGCAGGCCAACTATGTCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACCCCAGTTCCTCAAAGGATGGAAGTGTTTTGA 3057 0.4334 MMTSSAPSRGRRTRMTIFQRVLSLLISVSYLLTCLGNNEVPAQLNDDVLGLIVFKSDLQDPSSHLASWNEDDVNPCSWQFVQCNPESGRVSEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNNLSGGISPSLTLSNTLQRLNLSHNALSGSIPTSFVNMNSIKFLDLSENSFSGSIPETFFDTCSSLHHISLARNMFDGSVPGSLSRCSSLNNLNLSNNHLSGNVDFNGIWSLTRLRTLDLSNNALSGSLPSGISSIHNLKEILLQGNQFSGPLSTDIGFCIHLSRLDFSDNQFSGELPDSLGRLSSLSYFKASNNFFTSKFPPWIGNLTSLEFLELSNNQFTGSIPESIGELGSLSHLSISSNKLVGTIPSSLSSCTKLSVIQLRGNGFSGTIPEGLFGLGLEEIDLSRNELSGSVPAGSSRLLETLTNLDLSDNHLQGNIPAETGLLSKLSYLNLSWNDLQSQMPPEFGLLQNLAVLDIRNSALHGSVPADICDSGNLAVLQLDGNSLQGTIPEWIGNCSSLYLLSLSHNNLSGSIPKSMSKLNKLKILKLESNELSGEIPMELGMLQSLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLEGPCKMNVPKPLVLDPNAYNNQISPQRQRNESSESGPVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRKLSFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISSPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISTNIIQYPEDFDREVRILGKARHPNLIALKGYYWTPQLQLLVTEFAPNGSLQAKLHERLPSSPPLSWPIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDHSMNEYPEDEVLPVLKLAMVCTSQIPSSRPTMSEVVQILQVIKTPVPQRMEVF* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00259 1018 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 205 299 - -
Phac8g00259 1018 SUPERFAMILY L domain-like 60 398 - -
Phac8g00259 1018 ProSitePatterns Protein kinases ATP-binding region signature. 737 761 IPR017441 GO:0005524
Phac8g00259 1018 Gene3D Ribonuclease Inhibitor 201 326 IPR032675 -
Phac8g00259 1018 SMART LRR_typ_2 329 351 IPR003591 -
Phac8g00259 1018 SMART LRR_typ_2 353 377 IPR003591 -
Phac8g00259 1018 SMART LRR_typ_2 449 472 IPR003591 -
Phac8g00259 1018 SMART LRR_typ_2 233 257 IPR003591 -
Phac8g00259 1018 SMART LRR_typ_2 159 183 IPR003591 -
Phac8g00259 1018 SMART LRR_typ_2 111 135 IPR003591 -
Phac8g00259 1018 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 44 204 - -
Phac8g00259 1018 PRINTS Leucine-rich repeat signature 236 249 - -
Phac8g00259 1018 PRINTS Leucine-rich repeat signature 425 438 - -
Phac8g00259 1018 Gene3D Ribonuclease Inhibitor 47 200 IPR032675 -
Phac8g00259 1018 PANTHER RECEPTOR-LIKE PROTEIN 55 356 1005 - -
Phac8g00259 1018 FunFam Inactive leucine-rich repeat receptor-like protein kinase 325 618 - -
Phac8g00259 1018 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 725 808 - -
Phac8g00259 1018 Pfam Protein kinase domain 733 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00259 1018 Gene3D Ribonuclease Inhibitor 331 618 IPR032675 -
Phac8g00259 1018 ProSiteProfiles Protein kinase domain profile. 731 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g00259 1018 CDD STKc_IRAK 737 1005 - -
Phac8g00259 1018 SUPERFAMILY L domain-like 328 600 - -
Phac8g00259 1018 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Phac8g00259 1018 Gene3D Transferase(Phosphotransferase) domain 1 813 1015 - -
Phac8g00259 1018 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 809 1013 - -
Phac8g00259 1018 Pfam Leucine rich repeat 175 221 IPR001611 GO:0005515
Phac8g00259 1018 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Phac8g00259 1018 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Phac8g00259 1018 SUPERFAMILY Protein kinase-like (PK-like) 734 1012 IPR011009 -
Phac8g00259 1018 Gene3D Phosphorylase Kinase; domain 1 731 812 - -
Phac8g00259 1018 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00259 Phac-Chr8 1529020 1533016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00259 9 1015 Receptor kinase-like Gene Family AT3G28040 62.734 0.0 1246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Phac8g00259 Pkinase 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00259 - - pvu:PHAVU_008G017400g 1917.51