Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00256 ATGATTCCTCTTTGCTACTCAGATCATTACATGATTAGGTTTGCACATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTGCACGCTTTGAAGCAGAGGTGGTTGCAATGACAGCGGCACTTCTTGGAAGTAAGGAAATTAATTCTGGAGGACAAATATGTGGCAACATGACATCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCATCTCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCCTTGTCTGGACACTCAGCATATGACAAGGCTGCACAGTATTTTAATATCAAACTATGGCGTGCACCAGTTGACAAGAATTTTAAAGCGGATGTGAAAGCGATTCGACGCCTTATTAACAAAAATACCATCTTGATTGTTGGATCTGCTCCTGGGTTTCCTCATGGAATAATTGACCCCATCGAAGAACTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCATTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTCGATTTTTCTGTTAAAGGGGTTTCTTCAATATCAGTGGATGTACATAAATATGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTTTATAGAAACCATGAAATCAGAAAGAATCAATTTGTTGCTGTTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCAGGAAGTCTAATTGCGGGTGCGTGGGCAGCAATGATTTCTCTAGGGAAAGAAGGTTACTTGAAAAATACAAAAGCAATTATGGAAGGGTCAAGAAGAATACGGAAAGGCATAGAGGAGATTGCTGAGTTGTTCATTGTTGGAAAACCCGACATGACAATCGTGGCCTTGGGATCTGATGTTCTGGATATATTTGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCAAATAGCATCCACATCTGTGTTACACTACAACATGTTCCAATTGTTGAAGACTTTCTCAATGATTTGAAGGAATCTGTGAAAACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGGCTAGCACCTATATATGGAGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGATGGTACCTGCTAA 1203 0.4123 MIPLCYSDHYMIRFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEINSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPLSGHSAYDKAAQYFNIKLWRAPVDKNFKADVKAIRRLINKNTILIVGSAPGFPHGIIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKNQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLKNTKAIMEGSRRIRKGIEEIAELFIVGKPDMTIVALGSDVLDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00256 400 Gene3D - 11 264 IPR015421 GO:0003824
Phac8g00256 400 Gene3D Aspartate Aminotransferase, domain 1 265 363 IPR015422 GO:0003824
Phac8g00256 400 FunFam Sphingosine-1-phosphate lyase 1 360 399 - -
Phac8g00256 400 Pfam Pyridoxal-dependent decarboxylase conserved domain 29 304 IPR002129 GO:0016830|GO:0019752|GO:0030170
Phac8g00256 400 FunFam Sphingosine-1-phosphate lyase 1 251 363 - -
Phac8g00256 400 FunFam sphingosine-1-phosphate lyase 1 5 264 - -
Phac8g00256 400 PANTHER - 12 400 - -
Phac8g00256 400 SUPERFAMILY PLP-dependent transferases 10 363 IPR015424 -
Phac8g00256 400 Gene3D - 364 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00256 Phac-Chr8 1513105 1519754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00256 1 360 Calmodulin-binding Proteins AT3G17760 26.509 2.95e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00256 K01634 - gmx:100794743 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g00256 8 1513105 1519754 Phac8g00256 8 1513105 1519754 ECH